Gene : Phvul.008G184800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31945:SF6 - TRANSCRIPTION FACTOR BHLH61-RELATED Genomic Order:  1859
Name:  ? Phvul.008G184800 Secondary Identifier:  ? PAC:37160522
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G184800 0.5kb upstream 0.5kb upstream 2263 true Chr08: 52051144-52053406 Phaseolus vulgaris
Phvul.008G184800 0.5kb upstream 0.5kb upstream 500 false Chr08: 52051144-52051643 Phaseolus vulgaris
Phvul.008G184800 0.5kb downstream 0.5kb downstream 2263 true Chr08: 52051644-52053906 Phaseolus vulgaris
Phvul.008G184800 0.5kb downstream 0.5kb downstream 500 false Chr08: 52053407-52053906 Phaseolus vulgaris
Phvul.008G184800 1.0kb upstream 1.0kb upstream 2763 true Chr08: 52050644-52053406 Phaseolus vulgaris
Phvul.008G184800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 52050644-52051643 Phaseolus vulgaris
Phvul.008G184800 1.0kb downstream 1.0kb downstream 2763 true Chr08: 52051644-52054406 Phaseolus vulgaris
Phvul.008G184800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 52053407-52054406 Phaseolus vulgaris
Phvul.008G184800 2.0kb upstream 2.0kb upstream 3763 true Chr08: 52049644-52053406 Phaseolus vulgaris
Phvul.008G184800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 52049644-52051643 Phaseolus vulgaris
Phvul.008G184800 2.0kb downstream 2.0kb downstream 3763 true Chr08: 52051644-52055406 Phaseolus vulgaris
Phvul.008G184800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 52053407-52055406 Phaseolus vulgaris
Phvul.008G184800 5.0kb upstream 5.0kb upstream 6763 true Chr08: 52046644-52053406 Phaseolus vulgaris
Phvul.008G184800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 52046644-52051643 Phaseolus vulgaris
Phvul.008G184800 5.0kb downstream 5.0kb downstream 6763 true Chr08: 52051644-52058406 Phaseolus vulgaris
Phvul.008G184800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 52053407-52058406 Phaseolus vulgaris
Phvul.008G184800 10.0kb upstream 10.0kb upstream 11763 true Chr08: 52041644-52053406 Phaseolus vulgaris
Phvul.008G184800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 52041644-52051643 Phaseolus vulgaris
Phvul.008G184800 10.0kb downstream 10.0kb downstream 11763 true Chr08: 52051644-52063406 Phaseolus vulgaris
Phvul.008G184800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 52053407-52063406 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310483 5265 Fabidae View MSA
124070728 5270 Rosid View MSA
123747636 5271 Pentapetalae View MSA
122790182 5272 Eudicot View MSA
122048874 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0287176 0.0 0.142324 Low Low
cufflinks 0.510892 0.0 1.94507    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0521175 0.0 0.244721 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.6673 0.0 11.3899    
cufflinks 19.3805 0.0 51.0733   High
cufflinks 1.03157 0.0 3.69461    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0908335 0.0 0.401873 Low  

0 Strain