Gene : Phvul.008G189700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR12758:SF13 - GBF-INTERACTING PROTEIN 1 Genomic Order:  1907
Name:  ? Phvul.008G189700 Secondary Identifier:  ? PAC:37160419
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G189700 0.5kb upstream 0.5kb upstream 19858 true Chr08: 52789847-52809704 Phaseolus vulgaris
Phvul.008G189700 0.5kb upstream 0.5kb upstream 500 false Chr08: 52789847-52790346 Phaseolus vulgaris
Phvul.008G189700 0.5kb downstream 0.5kb downstream 19858 true Chr08: 52790347-52810204 Phaseolus vulgaris
Phvul.008G189700 0.5kb downstream 0.5kb downstream 500 false Chr08: 52809705-52810204 Phaseolus vulgaris
Phvul.008G189700 1.0kb upstream 1.0kb upstream 20358 true Chr08: 52789347-52809704 Phaseolus vulgaris
Phvul.008G189700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 52789347-52790346 Phaseolus vulgaris
Phvul.008G189700 1.0kb downstream 1.0kb downstream 20358 true Chr08: 52790347-52810704 Phaseolus vulgaris
Phvul.008G189700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 52809705-52810704 Phaseolus vulgaris
Phvul.008G189700 2.0kb upstream 2.0kb upstream 21358 true Chr08: 52788347-52809704 Phaseolus vulgaris
Phvul.008G189700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 52788347-52790346 Phaseolus vulgaris
Phvul.008G189700 2.0kb downstream 2.0kb downstream 21358 true Chr08: 52790347-52811704 Phaseolus vulgaris
Phvul.008G189700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 52809705-52811704 Phaseolus vulgaris
Phvul.008G189700 5.0kb upstream 5.0kb upstream 24358 true Chr08: 52785347-52809704 Phaseolus vulgaris
Phvul.008G189700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 52785347-52790346 Phaseolus vulgaris
Phvul.008G189700 5.0kb downstream 5.0kb downstream 24358 true Chr08: 52790347-52814704 Phaseolus vulgaris
Phvul.008G189700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 52809705-52814704 Phaseolus vulgaris
Phvul.008G189700 10.0kb upstream 10.0kb upstream 29358 true Chr08: 52780347-52809704 Phaseolus vulgaris
Phvul.008G189700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 52780347-52790346 Phaseolus vulgaris
Phvul.008G189700 10.0kb downstream 10.0kb downstream 29358 true Chr08: 52790347-52819704 Phaseolus vulgaris
Phvul.008G189700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 52809705-52819704 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303790 5265 Fabidae View MSA
124068947 5270 Rosid View MSA
123748451 5271 Pentapetalae View MSA
122772624 5272 Eudicot View MSA
122044535 5273 Angiosperm View MSA
121350111 5274 Embryophyte View MSA
123424635 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.58571 0.0 17.3789   Low
cufflinks 14.6366 0.0 37.8621    
cufflinks 10.6472 0.0 27.5592    
cufflinks 9.62092 0.0 24.9735   Low
cufflinks 15.3205 0.0 39.6406    
cufflinks 12.5444 0.0 32.4254    
cufflinks 14.745 0.0 38.1537    
cufflinks 14.3541 0.0 37.1375    
cufflinks 18.2895 0.0 47.5467   High
cufflinks 19.3234 0.0 50.3318   High
cufflinks 15.1029 0.0 39.0693    

0 Strain