Gene : Phvul.008G174900 P. vulgaris v2.1
Defline:  (1 of 13) PF00069//PF13947 - Protein kinase domain (Pkinase) // Wall-associated receptor kinase galacturonan-binding (GUB_WAK_bind) Genomic Order:  1760
Name:  ? Phvul.008G174900 Secondary Identifier:  ? PAC:37157575
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7409 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G174900 0.5kb upstream 0.5kb upstream 10287 true Chr08: 49367564-49377850 Phaseolus vulgaris
Phvul.008G174900 0.5kb upstream 0.5kb upstream 500 false Chr08: 49377351-49377850 Phaseolus vulgaris
Phvul.008G174900 0.5kb downstream 0.5kb downstream 10287 true Chr08: 49367064-49377350 Phaseolus vulgaris
Phvul.008G174900 0.5kb downstream 0.5kb downstream 500 false Chr08: 49367064-49367563 Phaseolus vulgaris
Phvul.008G174900 1.0kb upstream 1.0kb upstream 10787 true Chr08: 49367564-49378350 Phaseolus vulgaris
Phvul.008G174900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 49377351-49378350 Phaseolus vulgaris
Phvul.008G174900 1.0kb downstream 1.0kb downstream 10787 true Chr08: 49366564-49377350 Phaseolus vulgaris
Phvul.008G174900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 49366564-49367563 Phaseolus vulgaris
Phvul.008G174900 2.0kb upstream 2.0kb upstream 11787 true Chr08: 49367564-49379350 Phaseolus vulgaris
Phvul.008G174900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 49377351-49379350 Phaseolus vulgaris
Phvul.008G174900 2.0kb downstream 2.0kb downstream 11787 true Chr08: 49365564-49377350 Phaseolus vulgaris
Phvul.008G174900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 49365564-49367563 Phaseolus vulgaris
Phvul.008G174900 5.0kb upstream 5.0kb upstream 14787 true Chr08: 49367564-49382350 Phaseolus vulgaris
Phvul.008G174900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 49377351-49382350 Phaseolus vulgaris
Phvul.008G174900 5.0kb downstream 5.0kb downstream 14787 true Chr08: 49362564-49377350 Phaseolus vulgaris
Phvul.008G174900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 49362564-49367563 Phaseolus vulgaris
Phvul.008G174900 10.0kb upstream 10.0kb upstream 19787 true Chr08: 49367564-49387350 Phaseolus vulgaris
Phvul.008G174900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 49377351-49387350 Phaseolus vulgaris
Phvul.008G174900 10.0kb downstream 10.0kb downstream 19787 true Chr08: 49357564-49377350 Phaseolus vulgaris
Phvul.008G174900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 49357564-49367563 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314435 5265 Fabidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0325417 0.0 0.242748 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0684775 0.0 0.582203 Low  
cufflinks 0.0636676 0.0 0.46896 Low  
cufflinks 0.136231 0.0 0.916979 Low  
cufflinks 1.88844 0.0 10.3913   High
cufflinks 0.824665 0.0 3.20538    
cufflinks 2.34632 0.0 12.2022   High
cufflinks 0.00864833 0.0 0.148187 Low Low
cufflinks 0.07065 0.0 0.45196 Low  

0 Strain