Gene : Phvul.008G177500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD // SUBFAMILY NOT NAMED Genomic Order:  1788
Name:  ? Phvul.008G177500 Secondary Identifier:  ? PAC:37159046
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G177500 0.5kb upstream 0.5kb upstream 3228 true Chr08: 50089508-50092735 Phaseolus vulgaris
Phvul.008G177500 0.5kb upstream 0.5kb upstream 500 false Chr08: 50092236-50092735 Phaseolus vulgaris
Phvul.008G177500 0.5kb downstream 0.5kb downstream 3228 true Chr08: 50089008-50092235 Phaseolus vulgaris
Phvul.008G177500 0.5kb downstream 0.5kb downstream 500 false Chr08: 50089008-50089507 Phaseolus vulgaris
Phvul.008G177500 1.0kb upstream 1.0kb upstream 3728 true Chr08: 50089508-50093235 Phaseolus vulgaris
Phvul.008G177500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 50092236-50093235 Phaseolus vulgaris
Phvul.008G177500 1.0kb downstream 1.0kb downstream 3728 true Chr08: 50088508-50092235 Phaseolus vulgaris
Phvul.008G177500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 50088508-50089507 Phaseolus vulgaris
Phvul.008G177500 2.0kb upstream 2.0kb upstream 4728 true Chr08: 50089508-50094235 Phaseolus vulgaris
Phvul.008G177500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 50092236-50094235 Phaseolus vulgaris
Phvul.008G177500 2.0kb downstream 2.0kb downstream 4728 true Chr08: 50087508-50092235 Phaseolus vulgaris
Phvul.008G177500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 50087508-50089507 Phaseolus vulgaris
Phvul.008G177500 5.0kb upstream 5.0kb upstream 7728 true Chr08: 50089508-50097235 Phaseolus vulgaris
Phvul.008G177500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 50092236-50097235 Phaseolus vulgaris
Phvul.008G177500 5.0kb downstream 5.0kb downstream 7728 true Chr08: 50084508-50092235 Phaseolus vulgaris
Phvul.008G177500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 50084508-50089507 Phaseolus vulgaris
Phvul.008G177500 10.0kb upstream 10.0kb upstream 12728 true Chr08: 50089508-50102235 Phaseolus vulgaris
Phvul.008G177500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 50092236-50102235 Phaseolus vulgaris
Phvul.008G177500 10.0kb downstream 10.0kb downstream 12728 true Chr08: 50079508-50092235 Phaseolus vulgaris
Phvul.008G177500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 50079508-50089507 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311136 5265 Fabidae View MSA
124070189 5270 Rosid View MSA
123749285 5271 Pentapetalae View MSA
122794835 5272 Eudicot View MSA
122051154 5273 Angiosperm View MSA
121350598 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.89905 0.0 3.10066    
cufflinks 0.402553 0.0 1.49857 Low  
cufflinks 0.387703 0.0 1.44731 Low  
cufflinks 0.356412 0.0 1.34308 Low  
cufflinks 2.09355 0.0 6.57724    
cufflinks 1.43486 0.0 4.68915    
cufflinks 11.6788 0.0 30.8161   High
cufflinks 27.6085 0.0 71.4816   High
cufflinks 10.5403 0.0 28.0281   High
cufflinks 0.0998434 0.0 0.415936 Low Low
cufflinks 1.53324 0.0 4.98621    

0 Strain