Gene : Phvul.008G178400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR24078:SF247 - CHAPERONE PROTEIN DNAJ 1, MITOCHONDRIAL Genomic Order:  1797
Name:  ? Phvul.008G178400 Secondary Identifier:  ? PAC:37161139
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G178400 0.5kb upstream 0.5kb upstream 17992 true Chr08: 50453291-50471282 Phaseolus vulgaris
Phvul.008G178400 0.5kb upstream 0.5kb upstream 500 false Chr08: 50470783-50471282 Phaseolus vulgaris
Phvul.008G178400 0.5kb downstream 0.5kb downstream 17992 true Chr08: 50452791-50470782 Phaseolus vulgaris
Phvul.008G178400 0.5kb downstream 0.5kb downstream 500 false Chr08: 50452791-50453290 Phaseolus vulgaris
Phvul.008G178400 1.0kb upstream 1.0kb upstream 18492 true Chr08: 50453291-50471782 Phaseolus vulgaris
Phvul.008G178400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 50470783-50471782 Phaseolus vulgaris
Phvul.008G178400 1.0kb downstream 1.0kb downstream 18492 true Chr08: 50452291-50470782 Phaseolus vulgaris
Phvul.008G178400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 50452291-50453290 Phaseolus vulgaris
Phvul.008G178400 2.0kb upstream 2.0kb upstream 19492 true Chr08: 50453291-50472782 Phaseolus vulgaris
Phvul.008G178400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 50470783-50472782 Phaseolus vulgaris
Phvul.008G178400 2.0kb downstream 2.0kb downstream 19492 true Chr08: 50451291-50470782 Phaseolus vulgaris
Phvul.008G178400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 50451291-50453290 Phaseolus vulgaris
Phvul.008G178400 5.0kb upstream 5.0kb upstream 22492 true Chr08: 50453291-50475782 Phaseolus vulgaris
Phvul.008G178400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 50470783-50475782 Phaseolus vulgaris
Phvul.008G178400 5.0kb downstream 5.0kb downstream 22492 true Chr08: 50448291-50470782 Phaseolus vulgaris
Phvul.008G178400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 50448291-50453290 Phaseolus vulgaris
Phvul.008G178400 10.0kb upstream 10.0kb upstream 27492 true Chr08: 50453291-50480782 Phaseolus vulgaris
Phvul.008G178400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 50470783-50480782 Phaseolus vulgaris
Phvul.008G178400 10.0kb downstream 10.0kb downstream 27492 true Chr08: 50443291-50470782 Phaseolus vulgaris
Phvul.008G178400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 50443291-50453290 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301259 5265 Fabidae View MSA
124062124 5270 Rosid View MSA
123748060 5271 Pentapetalae View MSA
122787497 5272 Eudicot View MSA
122049089 5273 Angiosperm View MSA
123429128 5275 Viridiplantae View MSA
121311242 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.88884 0.0 16.0258   Low
cufflinks 4.33703 0.0 19.4368    
cufflinks 4.53947 0.0 22.1004    
cufflinks 4.72305 0.0 18.7621    
cufflinks 5.25714 0.0 26.9347    
cufflinks 3.81186 0.0 19.5161   Low
cufflinks 5.72927 0.0 31.0226   High
cufflinks 5.55405 0.0 25.6535    
cufflinks 5.6192 0.0 23.7478    
cufflinks 5.31663 0.0 34.7696    
cufflinks 5.48417 0.0 25.976    

0 Strain