Gene : Phvul.008G175500 P. vulgaris v2.1

Defline:  (1 of 4) PTHR11926//PTHR11926:SF286 - GLUCOSYL/GLUCURONOSYL TRANSFERASES // SUBFAMILY NOT NAMED Genomic Order:  1766
Name:  ? Phvul.008G175500 Secondary Identifier:  ? PAC:37160142

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G175500 0.5kb upstream 0.5kb upstream 2993 true Chr08: 49528636-49531628 Phaseolus vulgaris
Phvul.008G175500 0.5kb upstream 0.5kb upstream 500 false Chr08: 49531129-49531628 Phaseolus vulgaris
Phvul.008G175500 0.5kb downstream 0.5kb downstream 2993 true Chr08: 49528136-49531128 Phaseolus vulgaris
Phvul.008G175500 0.5kb downstream 0.5kb downstream 500 false Chr08: 49528136-49528635 Phaseolus vulgaris
Phvul.008G175500 1.0kb upstream 1.0kb upstream 3493 true Chr08: 49528636-49532128 Phaseolus vulgaris
Phvul.008G175500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 49531129-49532128 Phaseolus vulgaris
Phvul.008G175500 1.0kb downstream 1.0kb downstream 3493 true Chr08: 49527636-49531128 Phaseolus vulgaris
Phvul.008G175500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 49527636-49528635 Phaseolus vulgaris
Phvul.008G175500 2.0kb upstream 2.0kb upstream 4493 true Chr08: 49528636-49533128 Phaseolus vulgaris
Phvul.008G175500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 49531129-49533128 Phaseolus vulgaris
Phvul.008G175500 2.0kb downstream 2.0kb downstream 4493 true Chr08: 49526636-49531128 Phaseolus vulgaris
Phvul.008G175500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 49526636-49528635 Phaseolus vulgaris
Phvul.008G175500 5.0kb upstream 5.0kb upstream 7493 true Chr08: 49528636-49536128 Phaseolus vulgaris
Phvul.008G175500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 49531129-49536128 Phaseolus vulgaris
Phvul.008G175500 5.0kb downstream 5.0kb downstream 7493 true Chr08: 49523636-49531128 Phaseolus vulgaris
Phvul.008G175500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 49523636-49528635 Phaseolus vulgaris
Phvul.008G175500 10.0kb upstream 10.0kb upstream 12493 true Chr08: 49528636-49541128 Phaseolus vulgaris
Phvul.008G175500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 49531129-49541128 Phaseolus vulgaris
Phvul.008G175500 10.0kb downstream 10.0kb downstream 12493 true Chr08: 49518636-49531128 Phaseolus vulgaris
Phvul.008G175500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 49518636-49528635 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304092 5265 Fabidae View MSA
124060871 5270 Rosid View MSA
123749204 5271 Pentapetalae View MSA
122796718 5272 Eudicot View MSA
122051696 5273 Angiosperm View MSA
121351097 5274 Embryophyte View MSA
123428681 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.65339 0.0 11.0583    
cufflinks 0.247754 0.0 0.979211 Low  
cufflinks 12.5951 0.0 33.7396   High
cufflinks 6.70881 0.0 19.0928    
cufflinks 2.7672 0.0 8.69161    
cufflinks 1.2691 0.0 4.33838    
cufflinks 5.20351 0.0 15.1344    
cufflinks 6.26789 0.0 17.8349    
cufflinks 0.450274 0.0 1.69984 Low  
cufflinks 0.0162869 0.0 0.083828 Low Low
cufflinks 1.73391 0.0 5.74223    

0 Strain