Gene : Phvul.008G181500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12565//PTHR12565:SF120 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1826
Name:  ? Phvul.008G181500 Secondary Identifier:  ? PAC:37158247
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G181500 0.5kb upstream 0.5kb upstream 1910 true Chr08: 51333431-51335340 Phaseolus vulgaris
Phvul.008G181500 0.5kb upstream 0.5kb upstream 500 false Chr08: 51334841-51335340 Phaseolus vulgaris
Phvul.008G181500 0.5kb downstream 0.5kb downstream 1910 true Chr08: 51332931-51334840 Phaseolus vulgaris
Phvul.008G181500 0.5kb downstream 0.5kb downstream 500 false Chr08: 51332931-51333430 Phaseolus vulgaris
Phvul.008G181500 1.0kb upstream 1.0kb upstream 2410 true Chr08: 51333431-51335840 Phaseolus vulgaris
Phvul.008G181500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 51334841-51335840 Phaseolus vulgaris
Phvul.008G181500 1.0kb downstream 1.0kb downstream 2410 true Chr08: 51332431-51334840 Phaseolus vulgaris
Phvul.008G181500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 51332431-51333430 Phaseolus vulgaris
Phvul.008G181500 2.0kb upstream 2.0kb upstream 3410 true Chr08: 51333431-51336840 Phaseolus vulgaris
Phvul.008G181500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 51334841-51336840 Phaseolus vulgaris
Phvul.008G181500 2.0kb downstream 2.0kb downstream 3410 true Chr08: 51331431-51334840 Phaseolus vulgaris
Phvul.008G181500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 51331431-51333430 Phaseolus vulgaris
Phvul.008G181500 5.0kb upstream 5.0kb upstream 6410 true Chr08: 51333431-51339840 Phaseolus vulgaris
Phvul.008G181500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 51334841-51339840 Phaseolus vulgaris
Phvul.008G181500 5.0kb downstream 5.0kb downstream 6410 true Chr08: 51328431-51334840 Phaseolus vulgaris
Phvul.008G181500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 51328431-51333430 Phaseolus vulgaris
Phvul.008G181500 10.0kb upstream 10.0kb upstream 11410 true Chr08: 51333431-51344840 Phaseolus vulgaris
Phvul.008G181500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 51334841-51344840 Phaseolus vulgaris
Phvul.008G181500 10.0kb downstream 10.0kb downstream 11410 true Chr08: 51323431-51334840 Phaseolus vulgaris
Phvul.008G181500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 51323431-51333430 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300530 5265 Fabidae View MSA
124070702 5270 Rosid View MSA
123748515 5271 Pentapetalae View MSA
122793981 5272 Eudicot View MSA
122048947 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.34553 0.0 4.48745    
cufflinks 1.20621 0.0 4.06833    
cufflinks 0.708984 0.0 2.56032   Low
cufflinks 1.62022 0.0 5.29043    
cufflinks 5.14071 0.0 14.7233   High
cufflinks 1.91873 0.0 6.14216    
cufflinks 0.780667 0.0 2.73045   Low
cufflinks 0.879406 0.0 3.07111    
cufflinks 1.91437 0.0 6.05547    
cufflinks 9.08726 0.0 24.6834   High
cufflinks 1.97243 0.0 6.24344    

0 Strain