Gene : Phvul.008G172400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10788:SF25 - TREHALOSE-PHOSPHATE PHOSPHATASE D-RELATED Genomic Order:  1735
Name:  ? Phvul.008G172400 Secondary Identifier:  ? PAC:37158198
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G172400 0.5kb upstream 0.5kb upstream 3166 true Chr08: 48471887-48475052 Phaseolus vulgaris
Phvul.008G172400 0.5kb upstream 0.5kb upstream 500 false Chr08: 48474553-48475052 Phaseolus vulgaris
Phvul.008G172400 0.5kb downstream 0.5kb downstream 3166 true Chr08: 48471387-48474552 Phaseolus vulgaris
Phvul.008G172400 0.5kb downstream 0.5kb downstream 500 false Chr08: 48471387-48471886 Phaseolus vulgaris
Phvul.008G172400 1.0kb upstream 1.0kb upstream 3666 true Chr08: 48471887-48475552 Phaseolus vulgaris
Phvul.008G172400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 48474553-48475552 Phaseolus vulgaris
Phvul.008G172400 1.0kb downstream 1.0kb downstream 3666 true Chr08: 48470887-48474552 Phaseolus vulgaris
Phvul.008G172400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 48470887-48471886 Phaseolus vulgaris
Phvul.008G172400 2.0kb upstream 2.0kb upstream 4666 true Chr08: 48471887-48476552 Phaseolus vulgaris
Phvul.008G172400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 48474553-48476552 Phaseolus vulgaris
Phvul.008G172400 2.0kb downstream 2.0kb downstream 4666 true Chr08: 48469887-48474552 Phaseolus vulgaris
Phvul.008G172400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 48469887-48471886 Phaseolus vulgaris
Phvul.008G172400 5.0kb upstream 5.0kb upstream 7666 true Chr08: 48471887-48479552 Phaseolus vulgaris
Phvul.008G172400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 48474553-48479552 Phaseolus vulgaris
Phvul.008G172400 5.0kb downstream 5.0kb downstream 7666 true Chr08: 48466887-48474552 Phaseolus vulgaris
Phvul.008G172400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 48466887-48471886 Phaseolus vulgaris
Phvul.008G172400 10.0kb upstream 10.0kb upstream 12666 true Chr08: 48471887-48484552 Phaseolus vulgaris
Phvul.008G172400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 48474553-48484552 Phaseolus vulgaris
Phvul.008G172400 10.0kb downstream 10.0kb downstream 12666 true Chr08: 48461887-48474552 Phaseolus vulgaris
Phvul.008G172400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 48461887-48471886 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297464 5265 Fabidae View MSA
124069564 5270 Rosid View MSA
123746966 5271 Pentapetalae View MSA
122786046 5272 Eudicot View MSA
122042129 5273 Angiosperm View MSA
121351669 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.7345 0.0 38.6131   High
cufflinks 1.90273 0.0 6.09393    
cufflinks 0.322851 0.0 1.23124 Low Low
cufflinks 3.32178 0.0 10.0492    
cufflinks 2.36801 0.0 7.43948    
cufflinks 1.48321 0.0 4.87346    
cufflinks 12.8573 0.0 33.9423    
cufflinks 9.37717 0.0 25.3177    
cufflinks 20.5627 0.0 53.2688   High
cufflinks 4.49216 0.0 13.0928    
cufflinks 5.99972 0.0 16.9846    

0 Strain