Gene : Phvul.008G171300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10551//PTHR10551:SF12 - FASCIN // SUBFAMILY NOT NAMED Genomic Order:  1723
Name:  ? Phvul.008G171300 Secondary Identifier:  ? PAC:37158764
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G171300 0.5kb upstream 0.5kb upstream 4273 true Chr08: 47984525-47988797 Phaseolus vulgaris
Phvul.008G171300 0.5kb upstream 0.5kb upstream 500 false Chr08: 47988298-47988797 Phaseolus vulgaris
Phvul.008G171300 0.5kb downstream 0.5kb downstream 4273 true Chr08: 47984025-47988297 Phaseolus vulgaris
Phvul.008G171300 0.5kb downstream 0.5kb downstream 500 false Chr08: 47984025-47984524 Phaseolus vulgaris
Phvul.008G171300 1.0kb upstream 1.0kb upstream 4773 true Chr08: 47984525-47989297 Phaseolus vulgaris
Phvul.008G171300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 47988298-47989297 Phaseolus vulgaris
Phvul.008G171300 1.0kb downstream 1.0kb downstream 4773 true Chr08: 47983525-47988297 Phaseolus vulgaris
Phvul.008G171300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 47983525-47984524 Phaseolus vulgaris
Phvul.008G171300 2.0kb upstream 2.0kb upstream 5773 true Chr08: 47984525-47990297 Phaseolus vulgaris
Phvul.008G171300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 47988298-47990297 Phaseolus vulgaris
Phvul.008G171300 2.0kb downstream 2.0kb downstream 5773 true Chr08: 47982525-47988297 Phaseolus vulgaris
Phvul.008G171300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 47982525-47984524 Phaseolus vulgaris
Phvul.008G171300 5.0kb upstream 5.0kb upstream 8773 true Chr08: 47984525-47993297 Phaseolus vulgaris
Phvul.008G171300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 47988298-47993297 Phaseolus vulgaris
Phvul.008G171300 5.0kb downstream 5.0kb downstream 8773 true Chr08: 47979525-47988297 Phaseolus vulgaris
Phvul.008G171300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 47979525-47984524 Phaseolus vulgaris
Phvul.008G171300 10.0kb upstream 10.0kb upstream 13773 true Chr08: 47984525-47998297 Phaseolus vulgaris
Phvul.008G171300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 47988298-47998297 Phaseolus vulgaris
Phvul.008G171300 10.0kb downstream 10.0kb downstream 13773 true Chr08: 47974525-47988297 Phaseolus vulgaris
Phvul.008G171300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 47974525-47984524 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311820 5265 Fabidae View MSA
124070135 5270 Rosid View MSA
123746465 5271 Pentapetalae View MSA
122796777 5272 Eudicot View MSA
122048839 5273 Angiosperm View MSA
121348630 5274 Embryophyte View MSA
123380948 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.837961 0.0 2.97088    
cufflinks 0.409259 0.0 1.54563 Low Low
cufflinks 8.78407 0.0 24.0881   High
cufflinks 0.650375 0.0 2.37405    
cufflinks 1.46049 0.0 4.90403    
cufflinks 3.10478 0.0 9.49282    
cufflinks 8.75415 0.0 24.0256   High
cufflinks 2.91 0.0 8.94323    
cufflinks 4.9557 0.0 14.3866    
cufflinks 0.189455 0.0 0.761783 Low Low
cufflinks 2.1983 0.0 7.03851    

0 Strain