Gene : Phvul.008G158500 P. vulgaris v2.1
Defline:  (1 of 1) K02349 - DNA polymerase theta [EC:2.7.7.7] (POLQ) Genomic Order:  1585
Name:  ? Phvul.008G158500 Secondary Identifier:  ? PAC:37158616
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G158500 0.5kb upstream 0.5kb upstream 30995 true Chr08: 43109298-43140292 Phaseolus vulgaris
Phvul.008G158500 0.5kb upstream 0.5kb upstream 500 false Chr08: 43109298-43109797 Phaseolus vulgaris
Phvul.008G158500 0.5kb downstream 0.5kb downstream 30995 true Chr08: 43109798-43140792 Phaseolus vulgaris
Phvul.008G158500 0.5kb downstream 0.5kb downstream 500 false Chr08: 43140293-43140792 Phaseolus vulgaris
Phvul.008G158500 1.0kb upstream 1.0kb upstream 31495 true Chr08: 43108798-43140292 Phaseolus vulgaris
Phvul.008G158500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 43108798-43109797 Phaseolus vulgaris
Phvul.008G158500 1.0kb downstream 1.0kb downstream 31495 true Chr08: 43109798-43141292 Phaseolus vulgaris
Phvul.008G158500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 43140293-43141292 Phaseolus vulgaris
Phvul.008G158500 2.0kb upstream 2.0kb upstream 32495 true Chr08: 43107798-43140292 Phaseolus vulgaris
Phvul.008G158500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 43107798-43109797 Phaseolus vulgaris
Phvul.008G158500 2.0kb downstream 2.0kb downstream 32495 true Chr08: 43109798-43142292 Phaseolus vulgaris
Phvul.008G158500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 43140293-43142292 Phaseolus vulgaris
Phvul.008G158500 5.0kb upstream 5.0kb upstream 35495 true Chr08: 43104798-43140292 Phaseolus vulgaris
Phvul.008G158500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 43104798-43109797 Phaseolus vulgaris
Phvul.008G158500 5.0kb downstream 5.0kb downstream 35495 true Chr08: 43109798-43145292 Phaseolus vulgaris
Phvul.008G158500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 43140293-43145292 Phaseolus vulgaris
Phvul.008G158500 10.0kb upstream 10.0kb upstream 40495 true Chr08: 43099798-43140292 Phaseolus vulgaris
Phvul.008G158500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 43099798-43109797 Phaseolus vulgaris
Phvul.008G158500 10.0kb downstream 10.0kb downstream 40495 true Chr08: 43109798-43150292 Phaseolus vulgaris
Phvul.008G158500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 43140293-43150292 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303799 5265 Fabidae View MSA
124071198 5270 Rosid View MSA
123739145 5271 Pentapetalae View MSA
122788127 5272 Eudicot View MSA
122049803 5273 Angiosperm View MSA
121347623 5274 Embryophyte View MSA
123426060 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.339971 0.0 1.11983 Low Low
cufflinks 1.18628 0.0 3.39656    
cufflinks 4.1817 0.0 10.8669   High
cufflinks 0.425871 0.0 1.38383 Low Low
cufflinks 1.33822 0.0 3.81194    
cufflinks 2.77488 0.0 7.37613    
cufflinks 2.06143 0.0 5.61479    
cufflinks 2.28036 0.0 6.13136    
cufflinks 1.9047 0.0 5.23403    
cufflinks 2.0187 0.0 5.50881    
cufflinks 0.784673 0.0 2.36595    

0 Strain