Gene : Phvul.008G159800 P. vulgaris v2.1
Defline:  (1 of 3) PTHR11214//PTHR11214:SF7 - BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  1685
Name:  ? Phvul.008G159800 Secondary Identifier:  ? PAC:37160202
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G159800 0.5kb upstream 0.5kb upstream 4732 true Chr08: 46320617-46325348 Phaseolus vulgaris
Phvul.008G159800 0.5kb upstream 0.5kb upstream 500 false Chr08: 46324849-46325348 Phaseolus vulgaris
Phvul.008G159800 0.5kb downstream 0.5kb downstream 4732 true Chr08: 46320117-46324848 Phaseolus vulgaris
Phvul.008G159800 0.5kb downstream 0.5kb downstream 500 false Chr08: 46320117-46320616 Phaseolus vulgaris
Phvul.008G159800 1.0kb upstream 1.0kb upstream 5232 true Chr08: 46320617-46325848 Phaseolus vulgaris
Phvul.008G159800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 46324849-46325848 Phaseolus vulgaris
Phvul.008G159800 1.0kb downstream 1.0kb downstream 5232 true Chr08: 46319617-46324848 Phaseolus vulgaris
Phvul.008G159800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 46319617-46320616 Phaseolus vulgaris
Phvul.008G159800 2.0kb upstream 2.0kb upstream 6232 true Chr08: 46320617-46326848 Phaseolus vulgaris
Phvul.008G159800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 46324849-46326848 Phaseolus vulgaris
Phvul.008G159800 2.0kb downstream 2.0kb downstream 6232 true Chr08: 46318617-46324848 Phaseolus vulgaris
Phvul.008G159800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 46318617-46320616 Phaseolus vulgaris
Phvul.008G159800 5.0kb upstream 5.0kb upstream 9232 true Chr08: 46320617-46329848 Phaseolus vulgaris
Phvul.008G159800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 46324849-46329848 Phaseolus vulgaris
Phvul.008G159800 5.0kb downstream 5.0kb downstream 9232 true Chr08: 46315617-46324848 Phaseolus vulgaris
Phvul.008G159800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 46315617-46320616 Phaseolus vulgaris
Phvul.008G159800 10.0kb upstream 10.0kb upstream 14232 true Chr08: 46320617-46334848 Phaseolus vulgaris
Phvul.008G159800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 46324849-46334848 Phaseolus vulgaris
Phvul.008G159800 10.0kb downstream 10.0kb downstream 14232 true Chr08: 46310617-46324848 Phaseolus vulgaris
Phvul.008G159800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 46310617-46320616 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121616809 5273 Angiosperm Singleton cluster - no MSA
122252475 5265 Fabidae Singleton cluster - no MSA
123995223 5270 Rosid Singleton cluster - no MSA
123569836 5271 Pentapetalae Singleton cluster - no MSA
122604576 5272 Eudicot Singleton cluster - no MSA
120888979 5274 Embryophyte Singleton cluster - no MSA
122929717 5275 Viridiplantae Singleton cluster - no MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0452149 0.0 0.219127 Low Low
cufflinks 0.0212562 0.0 0.126799 Low Low
cufflinks 0.0391649 0.0 0.196155 Low Low
cufflinks 0.135576 0.0 0.575785 Low  
cufflinks 2.20009 0.0 7.75219   High
cufflinks 0.174156 0.0 0.711086 Low  
cufflinks 1.25984 0.0 7.98675    
cufflinks 0.160554 0.0 0.661142 Low  
cufflinks 0.364604 0.0 1.80332 Low  
cufflinks 1.34205 0.0 7.52097    
cufflinks 2.15539 0.0 11.7173   High

0 Strain