Gene : Phvul.008G158130 P. vulgaris v2.1
Defline:  (1 of 1) 2.1.1.79 - Cyclopropane-fatty-acyl-phospholipid synthase / Unsaturated-phospholipid methyltransferase Genomic Order:  1549
Name:  ? Phvul.008G158130 Secondary Identifier:  ? PAC:37157627
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-4942 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G158130 0.5kb upstream 0.5kb upstream 10138 true Chr08: 39340280-39350417 Phaseolus vulgaris
Phvul.008G158130 0.5kb upstream 0.5kb upstream 500 false Chr08: 39349918-39350417 Phaseolus vulgaris
Phvul.008G158130 0.5kb downstream 0.5kb downstream 10138 true Chr08: 39339780-39349917 Phaseolus vulgaris
Phvul.008G158130 0.5kb downstream 0.5kb downstream 500 false Chr08: 39339780-39340279 Phaseolus vulgaris
Phvul.008G158130 1.0kb upstream 1.0kb upstream 10638 true Chr08: 39340280-39350917 Phaseolus vulgaris
Phvul.008G158130 1.0kb upstream 1.0kb upstream 1000 false Chr08: 39349918-39350917 Phaseolus vulgaris
Phvul.008G158130 1.0kb downstream 1.0kb downstream 10638 true Chr08: 39339280-39349917 Phaseolus vulgaris
Phvul.008G158130 1.0kb downstream 1.0kb downstream 1000 false Chr08: 39339280-39340279 Phaseolus vulgaris
Phvul.008G158130 2.0kb upstream 2.0kb upstream 11638 true Chr08: 39340280-39351917 Phaseolus vulgaris
Phvul.008G158130 2.0kb upstream 2.0kb upstream 2000 false Chr08: 39349918-39351917 Phaseolus vulgaris
Phvul.008G158130 2.0kb downstream 2.0kb downstream 11638 true Chr08: 39338280-39349917 Phaseolus vulgaris
Phvul.008G158130 2.0kb downstream 2.0kb downstream 2000 false Chr08: 39338280-39340279 Phaseolus vulgaris
Phvul.008G158130 5.0kb upstream 5.0kb upstream 14638 true Chr08: 39340280-39354917 Phaseolus vulgaris
Phvul.008G158130 5.0kb upstream 5.0kb upstream 5000 false Chr08: 39349918-39354917 Phaseolus vulgaris
Phvul.008G158130 5.0kb downstream 5.0kb downstream 14638 true Chr08: 39335280-39349917 Phaseolus vulgaris
Phvul.008G158130 5.0kb downstream 5.0kb downstream 5000 false Chr08: 39335280-39340279 Phaseolus vulgaris
Phvul.008G158130 10.0kb upstream 10.0kb upstream 19638 true Chr08: 39340280-39359917 Phaseolus vulgaris
Phvul.008G158130 10.0kb upstream 10.0kb upstream 10000 false Chr08: 39349918-39359917 Phaseolus vulgaris
Phvul.008G158130 10.0kb downstream 10.0kb downstream 19638 true Chr08: 39330280-39349917 Phaseolus vulgaris
Phvul.008G158130 10.0kb downstream 10.0kb downstream 10000 false Chr08: 39330280-39340279 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303935 5265 Fabidae View MSA
124060864 5270 Rosid View MSA
123737400 5271 Pentapetalae View MSA
122792723 5272 Eudicot View MSA
122047395 5273 Angiosperm View MSA
121346129 5274 Embryophyte View MSA
123428105 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.714642 0.0 2.74114    
cufflinks 0.748694 0.0 2.75951    
cufflinks 29.4655 0.0 100.6   High
cufflinks 2.30358 0.0 8.54288    
cufflinks 1.91426 0.0 5.94762    
cufflinks 23.7873 0.0 78.3487   High
cufflinks 0.0572946 0.0 0.240711 Low Low
cufflinks 0.0320932 0.0 0.144614 Low Low
cufflinks 0.0508144 0.0 0.217257 Low Low
cufflinks 0.123581 0.0 0.486631 Low  
cufflinks 2.2726 0.0 8.24493    

0 Strain