Gene : Phvul.008G161200 P. vulgaris v2.1
Genomic Order:  1609 Name:  ? Phvul.008G161200
Secondary Identifier:  ? PAC:37158425
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G161200 0.5kb upstream 0.5kb upstream 3309 true Chr08: 43900961-43904269 Phaseolus vulgaris
Phvul.008G161200 0.5kb upstream 0.5kb upstream 500 false Chr08: 43900961-43901460 Phaseolus vulgaris
Phvul.008G161200 0.5kb downstream 0.5kb downstream 3309 true Chr08: 43901461-43904769 Phaseolus vulgaris
Phvul.008G161200 0.5kb downstream 0.5kb downstream 500 false Chr08: 43904270-43904769 Phaseolus vulgaris
Phvul.008G161200 1.0kb upstream 1.0kb upstream 3809 true Chr08: 43900461-43904269 Phaseolus vulgaris
Phvul.008G161200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 43900461-43901460 Phaseolus vulgaris
Phvul.008G161200 1.0kb downstream 1.0kb downstream 3809 true Chr08: 43901461-43905269 Phaseolus vulgaris
Phvul.008G161200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 43904270-43905269 Phaseolus vulgaris
Phvul.008G161200 2.0kb upstream 2.0kb upstream 4809 true Chr08: 43899461-43904269 Phaseolus vulgaris
Phvul.008G161200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 43899461-43901460 Phaseolus vulgaris
Phvul.008G161200 2.0kb downstream 2.0kb downstream 4809 true Chr08: 43901461-43906269 Phaseolus vulgaris
Phvul.008G161200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 43904270-43906269 Phaseolus vulgaris
Phvul.008G161200 5.0kb upstream 5.0kb upstream 7809 true Chr08: 43896461-43904269 Phaseolus vulgaris
Phvul.008G161200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 43896461-43901460 Phaseolus vulgaris
Phvul.008G161200 5.0kb downstream 5.0kb downstream 7809 true Chr08: 43901461-43909269 Phaseolus vulgaris
Phvul.008G161200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 43904270-43909269 Phaseolus vulgaris
Phvul.008G161200 10.0kb upstream 10.0kb upstream 12809 true Chr08: 43891461-43904269 Phaseolus vulgaris
Phvul.008G161200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 43891461-43901460 Phaseolus vulgaris
Phvul.008G161200 10.0kb downstream 10.0kb downstream 12809 true Chr08: 43901461-43914269 Phaseolus vulgaris
Phvul.008G161200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 43904270-43914269 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301763 5265 Fabidae View MSA
124065245 5270 Rosid View MSA
123748532 5271 Pentapetalae View MSA
122792835 5272 Eudicot View MSA
122046009 5273 Angiosperm View MSA
121345994 5274 Embryophyte View MSA
123380304 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.9673 0.0 49.0798   High
cufflinks 8.28193 0.0 24.4258    
cufflinks 9.84037 0.0 28.4418    
cufflinks 14.863 0.0 41.2941   High
cufflinks 9.83963 0.0 28.7091    
cufflinks 6.08003 0.0 18.6082   Low
cufflinks 5.87714 0.0 18.0498   Low
cufflinks 10.1121 0.0 29.2165    
cufflinks 6.17324 0.0 18.8612   Low
cufflinks 13.7879 0.0 38.722   High
cufflinks 6.94491 0.0 20.9546    

0 Strain