Gene : Phvul.008G160200 P. vulgaris v2.1
Defline:  (1 of 5) K02155 - V-type H+-transporting ATPase 16kDa proteolipid subunit (ATPeV0C, ATP6L) Genomic Order:  1681
Name:  ? Phvul.008G160200 Secondary Identifier:  ? PAC:37158613
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G160200 0.5kb upstream 0.5kb upstream 3338 true Chr08: 46179029-46182366 Phaseolus vulgaris
Phvul.008G160200 0.5kb upstream 0.5kb upstream 500 false Chr08: 46181867-46182366 Phaseolus vulgaris
Phvul.008G160200 0.5kb downstream 0.5kb downstream 3338 true Chr08: 46178529-46181866 Phaseolus vulgaris
Phvul.008G160200 0.5kb downstream 0.5kb downstream 500 false Chr08: 46178529-46179028 Phaseolus vulgaris
Phvul.008G160200 1.0kb upstream 1.0kb upstream 3838 true Chr08: 46179029-46182866 Phaseolus vulgaris
Phvul.008G160200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 46181867-46182866 Phaseolus vulgaris
Phvul.008G160200 1.0kb downstream 1.0kb downstream 3838 true Chr08: 46178029-46181866 Phaseolus vulgaris
Phvul.008G160200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 46178029-46179028 Phaseolus vulgaris
Phvul.008G160200 2.0kb upstream 2.0kb upstream 4838 true Chr08: 46179029-46183866 Phaseolus vulgaris
Phvul.008G160200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 46181867-46183866 Phaseolus vulgaris
Phvul.008G160200 2.0kb downstream 2.0kb downstream 4838 true Chr08: 46177029-46181866 Phaseolus vulgaris
Phvul.008G160200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 46177029-46179028 Phaseolus vulgaris
Phvul.008G160200 5.0kb upstream 5.0kb upstream 7838 true Chr08: 46179029-46186866 Phaseolus vulgaris
Phvul.008G160200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 46181867-46186866 Phaseolus vulgaris
Phvul.008G160200 5.0kb downstream 5.0kb downstream 7838 true Chr08: 46174029-46181866 Phaseolus vulgaris
Phvul.008G160200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 46174029-46179028 Phaseolus vulgaris
Phvul.008G160200 10.0kb upstream 10.0kb upstream 12838 true Chr08: 46179029-46191866 Phaseolus vulgaris
Phvul.008G160200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 46181867-46191866 Phaseolus vulgaris
Phvul.008G160200 10.0kb downstream 10.0kb downstream 12838 true Chr08: 46169029-46181866 Phaseolus vulgaris
Phvul.008G160200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 46169029-46179028 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298440 5265 Fabidae View MSA
124071141 5270 Rosid View MSA
123751721 5271 Pentapetalae View MSA
122796043 5272 Eudicot View MSA
122048360 5273 Angiosperm View MSA
121348011 5274 Embryophyte View MSA
123424193 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 155.02 0.0 422.076 High  
cufflinks 118.118 0.0 313.318 High  
cufflinks 204.254 0.0 565.909 High High
cufflinks 244.157 0.0 694.14 High High
cufflinks 185.59 0.0 512.923 High  
cufflinks 116.586 0.0 308.424 High  
cufflinks 95.2788 0.0 249.441 High Low
cufflinks 93.265 0.0 243.732 High Low
cufflinks 149.765 0.0 403.801 High  
cufflinks 142.086 0.0 383.148 High  
cufflinks 189.094 0.0 523.727 High  

0 Strain