Gene : Phvul.008G153800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24012:SF426 - RNA-BINDING PROTEIN-RELATED Genomic Order:  1476
Name:  ? Phvul.008G153800 Secondary Identifier:  ? PAC:37160966
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G153800 0.5kb upstream 0.5kb upstream 4004 true Chr08: 32480823-32484826 Phaseolus vulgaris
Phvul.008G153800 0.5kb upstream 0.5kb upstream 500 false Chr08: 32484327-32484826 Phaseolus vulgaris
Phvul.008G153800 0.5kb downstream 0.5kb downstream 4004 true Chr08: 32480323-32484326 Phaseolus vulgaris
Phvul.008G153800 0.5kb downstream 0.5kb downstream 500 false Chr08: 32480323-32480822 Phaseolus vulgaris
Phvul.008G153800 1.0kb upstream 1.0kb upstream 4504 true Chr08: 32480823-32485326 Phaseolus vulgaris
Phvul.008G153800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 32484327-32485326 Phaseolus vulgaris
Phvul.008G153800 1.0kb downstream 1.0kb downstream 4504 true Chr08: 32479823-32484326 Phaseolus vulgaris
Phvul.008G153800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 32479823-32480822 Phaseolus vulgaris
Phvul.008G153800 2.0kb upstream 2.0kb upstream 5504 true Chr08: 32480823-32486326 Phaseolus vulgaris
Phvul.008G153800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 32484327-32486326 Phaseolus vulgaris
Phvul.008G153800 2.0kb downstream 2.0kb downstream 5504 true Chr08: 32478823-32484326 Phaseolus vulgaris
Phvul.008G153800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 32478823-32480822 Phaseolus vulgaris
Phvul.008G153800 5.0kb upstream 5.0kb upstream 8504 true Chr08: 32480823-32489326 Phaseolus vulgaris
Phvul.008G153800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 32484327-32489326 Phaseolus vulgaris
Phvul.008G153800 5.0kb downstream 5.0kb downstream 8504 true Chr08: 32475823-32484326 Phaseolus vulgaris
Phvul.008G153800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 32475823-32480822 Phaseolus vulgaris
Phvul.008G153800 10.0kb upstream 10.0kb upstream 13504 true Chr08: 32480823-32494326 Phaseolus vulgaris
Phvul.008G153800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 32484327-32494326 Phaseolus vulgaris
Phvul.008G153800 10.0kb downstream 10.0kb downstream 13504 true Chr08: 32470823-32484326 Phaseolus vulgaris
Phvul.008G153800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 32470823-32480822 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311921 5265 Fabidae View MSA
124068966 5270 Rosid View MSA
123749875 5271 Pentapetalae View MSA
122795873 5272 Eudicot View MSA
122049849 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121351304 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 46.0462 0.0 122.235 High High
cufflinks 42.5876 0.0 112.095 High  
cufflinks 31.4231 0.0 81.4732    
cufflinks 55.082 0.0 146.598 High High
cufflinks 41.9821 0.0 110.095 High  
cufflinks 29.3338 0.0 76.0416    
cufflinks 27.0331 0.0 69.9919   Low
cufflinks 28.6862 0.0 74.4126 High Low
cufflinks 33.0149 0.0 85.7956 High  
cufflinks 34.9714 0.0 91.1477    
cufflinks 41.0522 0.0 107.712 High  

0 Strain