Gene : Phvul.008G154600 P. vulgaris v2.1

Defline:  (1 of 15) K10268 - F-box and leucine-rich repeat protein 2/20 (FBXL2_20) Genomic Order:  1527
Name:  ? Phvul.008G154600 Secondary Identifier:  ? PAC:37158293

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G154600 0.5kb upstream 0.5kb upstream 1886 true Chr08: 36119158-36121043 Phaseolus vulgaris
Phvul.008G154600 0.5kb upstream 0.5kb upstream 500 false Chr08: 36120544-36121043 Phaseolus vulgaris
Phvul.008G154600 0.5kb downstream 0.5kb downstream 1886 true Chr08: 36118658-36120543 Phaseolus vulgaris
Phvul.008G154600 0.5kb downstream 0.5kb downstream 500 false Chr08: 36118658-36119157 Phaseolus vulgaris
Phvul.008G154600 1.0kb upstream 1.0kb upstream 2386 true Chr08: 36119158-36121543 Phaseolus vulgaris
Phvul.008G154600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 36120544-36121543 Phaseolus vulgaris
Phvul.008G154600 1.0kb downstream 1.0kb downstream 2386 true Chr08: 36118158-36120543 Phaseolus vulgaris
Phvul.008G154600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 36118158-36119157 Phaseolus vulgaris
Phvul.008G154600 2.0kb upstream 2.0kb upstream 3386 true Chr08: 36119158-36122543 Phaseolus vulgaris
Phvul.008G154600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 36120544-36122543 Phaseolus vulgaris
Phvul.008G154600 2.0kb downstream 2.0kb downstream 3386 true Chr08: 36117158-36120543 Phaseolus vulgaris
Phvul.008G154600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 36117158-36119157 Phaseolus vulgaris
Phvul.008G154600 5.0kb upstream 5.0kb upstream 6386 true Chr08: 36119158-36125543 Phaseolus vulgaris
Phvul.008G154600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 36120544-36125543 Phaseolus vulgaris
Phvul.008G154600 5.0kb downstream 5.0kb downstream 6386 true Chr08: 36114158-36120543 Phaseolus vulgaris
Phvul.008G154600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 36114158-36119157 Phaseolus vulgaris
Phvul.008G154600 10.0kb upstream 10.0kb upstream 11386 true Chr08: 36119158-36130543 Phaseolus vulgaris
Phvul.008G154600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 36120544-36130543 Phaseolus vulgaris
Phvul.008G154600 10.0kb downstream 10.0kb downstream 11386 true Chr08: 36109158-36120543 Phaseolus vulgaris
Phvul.008G154600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 36109158-36119157 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307349 5265 Fabidae View MSA
124066290 5270 Rosid View MSA
123750705 5271 Pentapetalae View MSA
122788712 5272 Eudicot View MSA
122042802 5273 Angiosperm View MSA
121310027 5274 Embryophyte View MSA
123347630 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.4028 0.0 48.242   High
cufflinks 8.99427 0.0 25.0352    
cufflinks 2.89671 0.0 9.12197   Low
cufflinks 12.9619 0.0 34.8364    
cufflinks 11.716 0.0 31.6429    
cufflinks 6.21656 0.0 17.9352    
cufflinks 6.70298 0.0 19.1146    
cufflinks 3.3078 0.0 10.2723   Low
cufflinks 8.33097 0.0 23.3753    
cufflinks 9.18239 0.0 25.4748    
cufflinks 14.5691 0.0 38.8405    

0 Strain