Gene : Phvul.008G153200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22939:SF67 - PROTEASE DO-LIKE 9 Genomic Order:  1481
Name:  ? Phvul.008G153200 Secondary Identifier:  ? PAC:37157884
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G153200 0.5kb upstream 0.5kb upstream 19895 true Chr08: 32824448-32844342 Phaseolus vulgaris
Phvul.008G153200 0.5kb upstream 0.5kb upstream 500 false Chr08: 32843843-32844342 Phaseolus vulgaris
Phvul.008G153200 0.5kb downstream 0.5kb downstream 19895 true Chr08: 32823948-32843842 Phaseolus vulgaris
Phvul.008G153200 0.5kb downstream 0.5kb downstream 500 false Chr08: 32823948-32824447 Phaseolus vulgaris
Phvul.008G153200 1.0kb upstream 1.0kb upstream 20395 true Chr08: 32824448-32844842 Phaseolus vulgaris
Phvul.008G153200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 32843843-32844842 Phaseolus vulgaris
Phvul.008G153200 1.0kb downstream 1.0kb downstream 20395 true Chr08: 32823448-32843842 Phaseolus vulgaris
Phvul.008G153200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 32823448-32824447 Phaseolus vulgaris
Phvul.008G153200 2.0kb upstream 2.0kb upstream 21395 true Chr08: 32824448-32845842 Phaseolus vulgaris
Phvul.008G153200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 32843843-32845842 Phaseolus vulgaris
Phvul.008G153200 2.0kb downstream 2.0kb downstream 21395 true Chr08: 32822448-32843842 Phaseolus vulgaris
Phvul.008G153200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 32822448-32824447 Phaseolus vulgaris
Phvul.008G153200 5.0kb upstream 5.0kb upstream 24395 true Chr08: 32824448-32848842 Phaseolus vulgaris
Phvul.008G153200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 32843843-32848842 Phaseolus vulgaris
Phvul.008G153200 5.0kb downstream 5.0kb downstream 24395 true Chr08: 32819448-32843842 Phaseolus vulgaris
Phvul.008G153200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 32819448-32824447 Phaseolus vulgaris
Phvul.008G153200 10.0kb upstream 10.0kb upstream 29395 true Chr08: 32824448-32853842 Phaseolus vulgaris
Phvul.008G153200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 32843843-32853842 Phaseolus vulgaris
Phvul.008G153200 10.0kb downstream 10.0kb downstream 29395 true Chr08: 32814448-32843842 Phaseolus vulgaris
Phvul.008G153200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 32814448-32824447 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310329 5265 Fabidae View MSA
124072965 5270 Rosid View MSA
123741119 5271 Pentapetalae View MSA
122794115 5272 Eudicot View MSA
122046723 5273 Angiosperm View MSA
121346662 5274 Embryophyte View MSA
123426440 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.76142 0.0 20.6828   Low
cufflinks 9.96515 0.0 26.1636    
cufflinks 12.1234 0.0 31.5694    
cufflinks 10.3969 0.0 27.2178    
cufflinks 11.4564 0.0 29.9071    
cufflinks 9.85309 0.0 25.8851    
cufflinks 11.1214 0.0 28.9804    
cufflinks 10.0663 0.0 26.3615    
cufflinks 13.1686 0.0 34.1562   High
cufflinks 8.74452 0.0 23.1361   Low
cufflinks 11.3706 0.0 29.6599    

0 Strain