Gene : Phvul.008G142000 P. vulgaris v2.1

Defline:  (1 of 59) 3.6.3.44 - Xenobiotic-transporting ATPase / Steroid-transporting ATPase Genomic Order:  1338
Name:  ? Phvul.008G142000 Secondary Identifier:  ? PAC:37160158

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G142000 0.5kb upstream 0.5kb upstream 6531 true Chr08: 21955524-21962054 Phaseolus vulgaris
Phvul.008G142000 0.5kb upstream 0.5kb upstream 500 false Chr08: 21961555-21962054 Phaseolus vulgaris
Phvul.008G142000 0.5kb downstream 0.5kb downstream 6531 true Chr08: 21955024-21961554 Phaseolus vulgaris
Phvul.008G142000 0.5kb downstream 0.5kb downstream 500 false Chr08: 21955024-21955523 Phaseolus vulgaris
Phvul.008G142000 1.0kb upstream 1.0kb upstream 7031 true Chr08: 21955524-21962554 Phaseolus vulgaris
Phvul.008G142000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 21961555-21962554 Phaseolus vulgaris
Phvul.008G142000 1.0kb downstream 1.0kb downstream 7031 true Chr08: 21954524-21961554 Phaseolus vulgaris
Phvul.008G142000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 21954524-21955523 Phaseolus vulgaris
Phvul.008G142000 2.0kb upstream 2.0kb upstream 8031 true Chr08: 21955524-21963554 Phaseolus vulgaris
Phvul.008G142000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 21961555-21963554 Phaseolus vulgaris
Phvul.008G142000 2.0kb downstream 2.0kb downstream 8031 true Chr08: 21953524-21961554 Phaseolus vulgaris
Phvul.008G142000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 21953524-21955523 Phaseolus vulgaris
Phvul.008G142000 5.0kb upstream 5.0kb upstream 11031 true Chr08: 21955524-21966554 Phaseolus vulgaris
Phvul.008G142000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 21961555-21966554 Phaseolus vulgaris
Phvul.008G142000 5.0kb downstream 5.0kb downstream 11031 true Chr08: 21950524-21961554 Phaseolus vulgaris
Phvul.008G142000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 21950524-21955523 Phaseolus vulgaris
Phvul.008G142000 10.0kb upstream 10.0kb upstream 16031 true Chr08: 21955524-21971554 Phaseolus vulgaris
Phvul.008G142000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 21961555-21971554 Phaseolus vulgaris
Phvul.008G142000 10.0kb downstream 10.0kb downstream 16031 true Chr08: 21945524-21961554 Phaseolus vulgaris
Phvul.008G142000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 21945524-21955523 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303090 5265 Fabidae View MSA
124073874 5270 Rosid View MSA
123740561 5271 Pentapetalae View MSA
122793692 5272 Eudicot View MSA
122051642 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121350540 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0304219 0.0 0.130814 Low  
cufflinks 0.0938342 0.0 0.368038 Low  
cufflinks 0.0645875 0.0 0.260024 Low  
cufflinks 0.203154 0.0 0.755021 Low  
cufflinks 0.243213 0.0 0.886692 Low High
cufflinks 0.446414 0.0 1.52148 Low High
cufflinks 0.0617053 0.0 0.250546 Low  
cufflinks 0.0245563 0.0 0.107524 Low  
cufflinks 0.0787678 0.0 0.314589 Low  
cufflinks 0.00402062 0.0 0.0215059 Low Low
cufflinks 0.0324977 0.0 0.139861 Low  

0 Strain