Gene : Phvul.008G141800 P. vulgaris v2.1
Defline:  (1 of 3) K02969 - small subunit ribosomal protein S20e (RP-S20e, RPS20) Genomic Order:  1336
Name:  ? Phvul.008G141800 Secondary Identifier:  ? PAC:37157651
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G141800 0.5kb upstream 0.5kb upstream 2082 true Chr08: 21910322-21912403 Phaseolus vulgaris
Phvul.008G141800 0.5kb upstream 0.5kb upstream 500 false Chr08: 21911904-21912403 Phaseolus vulgaris
Phvul.008G141800 0.5kb downstream 0.5kb downstream 2082 true Chr08: 21909822-21911903 Phaseolus vulgaris
Phvul.008G141800 0.5kb downstream 0.5kb downstream 500 false Chr08: 21909822-21910321 Phaseolus vulgaris
Phvul.008G141800 1.0kb upstream 1.0kb upstream 2582 true Chr08: 21910322-21912903 Phaseolus vulgaris
Phvul.008G141800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 21911904-21912903 Phaseolus vulgaris
Phvul.008G141800 1.0kb downstream 1.0kb downstream 2582 true Chr08: 21909322-21911903 Phaseolus vulgaris
Phvul.008G141800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 21909322-21910321 Phaseolus vulgaris
Phvul.008G141800 2.0kb upstream 2.0kb upstream 3582 true Chr08: 21910322-21913903 Phaseolus vulgaris
Phvul.008G141800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 21911904-21913903 Phaseolus vulgaris
Phvul.008G141800 2.0kb downstream 2.0kb downstream 3582 true Chr08: 21908322-21911903 Phaseolus vulgaris
Phvul.008G141800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 21908322-21910321 Phaseolus vulgaris
Phvul.008G141800 5.0kb upstream 5.0kb upstream 6582 true Chr08: 21910322-21916903 Phaseolus vulgaris
Phvul.008G141800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 21911904-21916903 Phaseolus vulgaris
Phvul.008G141800 5.0kb downstream 5.0kb downstream 6582 true Chr08: 21905322-21911903 Phaseolus vulgaris
Phvul.008G141800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 21905322-21910321 Phaseolus vulgaris
Phvul.008G141800 10.0kb upstream 10.0kb upstream 11582 true Chr08: 21910322-21921903 Phaseolus vulgaris
Phvul.008G141800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 21911904-21921903 Phaseolus vulgaris
Phvul.008G141800 10.0kb downstream 10.0kb downstream 11582 true Chr08: 21900322-21911903 Phaseolus vulgaris
Phvul.008G141800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 21900322-21910321 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309868 5265 Fabidae View MSA
124068920 5270 Rosid View MSA
123743222 5271 Pentapetalae View MSA
122791885 5272 Eudicot View MSA
122044190 5273 Angiosperm View MSA
121349858 5274 Embryophyte View MSA
123426171 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 160.373 0.0 428.431 High  
cufflinks 181.591 0.0 489.808 High  
cufflinks 86.1882 0.0 223.269 High Low
cufflinks 244.043 0.0 675.394 High High
cufflinks 175.389 0.0 470.701 High  
cufflinks 81.1438 0.0 209.983 High Low
cufflinks 100.514 0.0 261.542 High  
cufflinks 123.953 0.0 325.377 High  
cufflinks 152.735 0.0 406.408 High  
cufflinks 94.7649 0.0 245.843 High  
cufflinks 162.869 0.0 434.924 High  

0 Strain