Gene : Phvul.008G133700 P. vulgaris v2.1
Defline:  (1 of 2) K02693 - photosystem I subunit IV (psaE) Genomic Order:  1351
Name:  ? Phvul.008G133700 Secondary Identifier:  ? PAC:37158740
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G133700 0.5kb upstream 0.5kb upstream 2007 true Chr08: 22277411-22279417 Phaseolus vulgaris
Phvul.008G133700 0.5kb upstream 0.5kb upstream 500 false Chr08: 22277411-22277910 Phaseolus vulgaris
Phvul.008G133700 0.5kb downstream 0.5kb downstream 2007 true Chr08: 22277911-22279917 Phaseolus vulgaris
Phvul.008G133700 0.5kb downstream 0.5kb downstream 500 false Chr08: 22279418-22279917 Phaseolus vulgaris
Phvul.008G133700 1.0kb upstream 1.0kb upstream 2507 true Chr08: 22276911-22279417 Phaseolus vulgaris
Phvul.008G133700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 22276911-22277910 Phaseolus vulgaris
Phvul.008G133700 1.0kb downstream 1.0kb downstream 2507 true Chr08: 22277911-22280417 Phaseolus vulgaris
Phvul.008G133700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 22279418-22280417 Phaseolus vulgaris
Phvul.008G133700 2.0kb upstream 2.0kb upstream 3507 true Chr08: 22275911-22279417 Phaseolus vulgaris
Phvul.008G133700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 22275911-22277910 Phaseolus vulgaris
Phvul.008G133700 2.0kb downstream 2.0kb downstream 3507 true Chr08: 22277911-22281417 Phaseolus vulgaris
Phvul.008G133700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 22279418-22281417 Phaseolus vulgaris
Phvul.008G133700 5.0kb upstream 5.0kb upstream 6507 true Chr08: 22272911-22279417 Phaseolus vulgaris
Phvul.008G133700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 22272911-22277910 Phaseolus vulgaris
Phvul.008G133700 5.0kb downstream 5.0kb downstream 6507 true Chr08: 22277911-22284417 Phaseolus vulgaris
Phvul.008G133700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 22279418-22284417 Phaseolus vulgaris
Phvul.008G133700 10.0kb upstream 10.0kb upstream 11507 true Chr08: 22267911-22279417 Phaseolus vulgaris
Phvul.008G133700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 22267911-22277910 Phaseolus vulgaris
Phvul.008G133700 10.0kb downstream 10.0kb downstream 11507 true Chr08: 22277911-22289417 Phaseolus vulgaris
Phvul.008G133700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 22279418-22289417 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304273 5265 Fabidae View MSA
124068589 5270 Rosid View MSA
123747276 5271 Pentapetalae View MSA
122791001 5272 Eudicot View MSA
122047877 5273 Angiosperm View MSA
121348572 5274 Embryophyte View MSA
123426677 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 140.303 0.0 367.98 High  
cufflinks 210.361 0.0 567.741 High  
cufflinks 1452.81 0.0 5390.37 High High
cufflinks 130.294 0.0 341.364 High  
cufflinks 192.069 0.0 514.815 High  
cufflinks 416.848 0.0 1213.98 High  
cufflinks 3.04699 0.0 10.4769   Low
cufflinks 8.95355 0.0 27.3208   Low
cufflinks 5.40706 0.0 17.3677   Low
cufflinks 91.0112 0.0 235.288 High  
cufflinks 123.57 0.0 321.857 High  

0 Strain