Gene : Phvul.008G133450 P. vulgaris v2.1
Defline:  (1 of 3) K02995 - small subunit ribosomal protein S8e (RP-S8e, RPS8) Genomic Order:  1348
Name:  ? Phvul.008G133450 Secondary Identifier:  ? PAC:37158821
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G133450 0.5kb upstream 0.5kb upstream 2969 true Chr08: 22193996-22196964 Phaseolus vulgaris
Phvul.008G133450 0.5kb upstream 0.5kb upstream 500 false Chr08: 22193996-22194495 Phaseolus vulgaris
Phvul.008G133450 0.5kb downstream 0.5kb downstream 2969 true Chr08: 22194496-22197464 Phaseolus vulgaris
Phvul.008G133450 0.5kb downstream 0.5kb downstream 500 false Chr08: 22196965-22197464 Phaseolus vulgaris
Phvul.008G133450 1.0kb upstream 1.0kb upstream 3469 true Chr08: 22193496-22196964 Phaseolus vulgaris
Phvul.008G133450 1.0kb upstream 1.0kb upstream 1000 false Chr08: 22193496-22194495 Phaseolus vulgaris
Phvul.008G133450 1.0kb downstream 1.0kb downstream 3469 true Chr08: 22194496-22197964 Phaseolus vulgaris
Phvul.008G133450 1.0kb downstream 1.0kb downstream 1000 false Chr08: 22196965-22197964 Phaseolus vulgaris
Phvul.008G133450 2.0kb upstream 2.0kb upstream 4469 true Chr08: 22192496-22196964 Phaseolus vulgaris
Phvul.008G133450 2.0kb upstream 2.0kb upstream 2000 false Chr08: 22192496-22194495 Phaseolus vulgaris
Phvul.008G133450 2.0kb downstream 2.0kb downstream 4469 true Chr08: 22194496-22198964 Phaseolus vulgaris
Phvul.008G133450 2.0kb downstream 2.0kb downstream 2000 false Chr08: 22196965-22198964 Phaseolus vulgaris
Phvul.008G133450 5.0kb upstream 5.0kb upstream 7469 true Chr08: 22189496-22196964 Phaseolus vulgaris
Phvul.008G133450 5.0kb upstream 5.0kb upstream 5000 false Chr08: 22189496-22194495 Phaseolus vulgaris
Phvul.008G133450 5.0kb downstream 5.0kb downstream 7469 true Chr08: 22194496-22201964 Phaseolus vulgaris
Phvul.008G133450 5.0kb downstream 5.0kb downstream 5000 false Chr08: 22196965-22201964 Phaseolus vulgaris
Phvul.008G133450 10.0kb upstream 10.0kb upstream 12469 true Chr08: 22184496-22196964 Phaseolus vulgaris
Phvul.008G133450 10.0kb upstream 10.0kb upstream 10000 false Chr08: 22184496-22194495 Phaseolus vulgaris
Phvul.008G133450 10.0kb downstream 10.0kb downstream 12469 true Chr08: 22194496-22206964 Phaseolus vulgaris
Phvul.008G133450 10.0kb downstream 10.0kb downstream 10000 false Chr08: 22196965-22206964 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313360 5265 Fabidae View MSA
124069380 5270 Rosid View MSA
123753102 5271 Pentapetalae View MSA
122794895 5272 Eudicot View MSA
122047330 5273 Angiosperm View MSA
121343984 5274 Embryophyte View MSA
123428186 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 205.587 0.0 600.023 High  
cufflinks 257.774 0.0 783.283 High  
cufflinks 115.59 0.0 317.637 High Low
cufflinks 247.793 0.0 738.591 High  
cufflinks 206.224 0.0 599.817 High  
cufflinks 107.858 0.0 294.643 High Low
cufflinks 182.986 0.0 531.796 High  
cufflinks 211.673 0.0 630.51 High  
cufflinks 238.034 0.0 717.788 High  
cufflinks 86.8251 0.0 231.898 High Low
cufflinks 232.125 0.0 692.673 High  

0 Strain