Gene : Phvul.008G266700 P. vulgaris v2.1
Defline:  (1 of 159) PTHR14155 - RING FINGER DOMAIN-CONTAINING Genomic Order:  2680
Name:  ? Phvul.008G266700 Secondary Identifier:  ? PAC:37158801
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G266700 0.5kb upstream 0.5kb upstream 2025 true Chr08: 61214641-61216665 Phaseolus vulgaris
Phvul.008G266700 0.5kb upstream 0.5kb upstream 500 false Chr08: 61214641-61215140 Phaseolus vulgaris
Phvul.008G266700 0.5kb downstream 0.5kb downstream 2025 true Chr08: 61215141-61217165 Phaseolus vulgaris
Phvul.008G266700 0.5kb downstream 0.5kb downstream 500 false Chr08: 61216666-61217165 Phaseolus vulgaris
Phvul.008G266700 1.0kb upstream 1.0kb upstream 2525 true Chr08: 61214141-61216665 Phaseolus vulgaris
Phvul.008G266700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 61214141-61215140 Phaseolus vulgaris
Phvul.008G266700 1.0kb downstream 1.0kb downstream 2525 true Chr08: 61215141-61217665 Phaseolus vulgaris
Phvul.008G266700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 61216666-61217665 Phaseolus vulgaris
Phvul.008G266700 2.0kb upstream 2.0kb upstream 3525 true Chr08: 61213141-61216665 Phaseolus vulgaris
Phvul.008G266700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 61213141-61215140 Phaseolus vulgaris
Phvul.008G266700 2.0kb downstream 2.0kb downstream 3525 true Chr08: 61215141-61218665 Phaseolus vulgaris
Phvul.008G266700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 61216666-61218665 Phaseolus vulgaris
Phvul.008G266700 5.0kb upstream 5.0kb upstream 6525 true Chr08: 61210141-61216665 Phaseolus vulgaris
Phvul.008G266700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 61210141-61215140 Phaseolus vulgaris
Phvul.008G266700 5.0kb downstream 5.0kb downstream 6525 true Chr08: 61215141-61221665 Phaseolus vulgaris
Phvul.008G266700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 61216666-61221665 Phaseolus vulgaris
Phvul.008G266700 10.0kb upstream 10.0kb upstream 11525 true Chr08: 61205141-61216665 Phaseolus vulgaris
Phvul.008G266700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 61205141-61215140 Phaseolus vulgaris
Phvul.008G266700 10.0kb downstream 10.0kb downstream 11525 true Chr08: 61215141-61226665 Phaseolus vulgaris
Phvul.008G266700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 61216666-61226665 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791916 5273 Angiosperm View MSA
122311748 5265 Fabidae View MSA
124064654 5270 Rosid View MSA
123747465 5271 Pentapetalae View MSA
122795286 5272 Eudicot View MSA
123429130 5275 Viridiplantae View MSA
121063185 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.985922 0.0 3.6882    
cufflinks 2.74193 0.0 9.32838   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.38771 0.0 8.28089    
cufflinks 0.0812819 0.0 0.381664 Low Low
cufflinks 0.118957 0.0 0.533875 Low Low
cufflinks 1.89664 0.0 6.70446    
cufflinks 1.0485 0.0 3.89407    
cufflinks 2.09406 0.0 7.34489    
cufflinks 0.197449 0.0 0.846143 Low  
cufflinks 0.0972709 0.0 0.448145 Low Low

0 Strain