Gene : Phvul.008G268400 P. vulgaris v2.1
Defline:  (1 of 6) PF02330 - Mitochondrial glycoprotein (MAM33) Genomic Order:  2697
Name:  ? Phvul.008G268400 Secondary Identifier:  ? PAC:37160387
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G268400 0.5kb upstream 0.5kb upstream 2765 true Chr08: 61321088-61323852 Phaseolus vulgaris
Phvul.008G268400 0.5kb upstream 0.5kb upstream 500 false Chr08: 61321088-61321587 Phaseolus vulgaris
Phvul.008G268400 0.5kb downstream 0.5kb downstream 2765 true Chr08: 61321588-61324352 Phaseolus vulgaris
Phvul.008G268400 0.5kb downstream 0.5kb downstream 500 false Chr08: 61323853-61324352 Phaseolus vulgaris
Phvul.008G268400 1.0kb upstream 1.0kb upstream 3265 true Chr08: 61320588-61323852 Phaseolus vulgaris
Phvul.008G268400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 61320588-61321587 Phaseolus vulgaris
Phvul.008G268400 1.0kb downstream 1.0kb downstream 3265 true Chr08: 61321588-61324852 Phaseolus vulgaris
Phvul.008G268400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 61323853-61324852 Phaseolus vulgaris
Phvul.008G268400 2.0kb upstream 2.0kb upstream 4265 true Chr08: 61319588-61323852 Phaseolus vulgaris
Phvul.008G268400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 61319588-61321587 Phaseolus vulgaris
Phvul.008G268400 2.0kb downstream 2.0kb downstream 4265 true Chr08: 61321588-61325852 Phaseolus vulgaris
Phvul.008G268400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 61323853-61325852 Phaseolus vulgaris
Phvul.008G268400 5.0kb upstream 5.0kb upstream 7265 true Chr08: 61316588-61323852 Phaseolus vulgaris
Phvul.008G268400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 61316588-61321587 Phaseolus vulgaris
Phvul.008G268400 5.0kb downstream 5.0kb downstream 7265 true Chr08: 61321588-61328852 Phaseolus vulgaris
Phvul.008G268400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 61323853-61328852 Phaseolus vulgaris
Phvul.008G268400 10.0kb upstream 10.0kb upstream 12265 true Chr08: 61311588-61323852 Phaseolus vulgaris
Phvul.008G268400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 61311588-61321587 Phaseolus vulgaris
Phvul.008G268400 10.0kb downstream 10.0kb downstream 12265 true Chr08: 61321588-61333852 Phaseolus vulgaris
Phvul.008G268400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 61323853-61333852 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302730 5265 Fabidae View MSA
124068759 5270 Rosid View MSA
123737950 5271 Pentapetalae View MSA
122793276 5272 Eudicot View MSA
122044339 5273 Angiosperm View MSA
121310280 5274 Embryophyte View MSA
123426635 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.6694 0.0 30.0506    
cufflinks 14.5788 0.0 39.9812    
cufflinks 6.54696 0.0 19.5316   Low
cufflinks 16.9311 0.0 45.7058   High
cufflinks 14.1619 0.0 38.8611    
cufflinks 4.58204 0.0 14.1867   Low
cufflinks 8.4283 0.0 24.2394    
cufflinks 9.28964 0.0 26.5734    
cufflinks 10.6624 0.0 29.9862    
cufflinks 11.582 0.0 32.3243    
cufflinks 12.9895 0.0 35.8724    

0 Strain