Gene : Phvul.008G255300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31288:SF5 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MXL8-RELATED Genomic Order:  2566
Name:  ? Phvul.008G255300 Secondary Identifier:  ? PAC:37159655
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G255300 0.5kb upstream 0.5kb upstream 3999 true Chr08: 60313441-60317439 Phaseolus vulgaris
Phvul.008G255300 0.5kb upstream 0.5kb upstream 500 false Chr08: 60316940-60317439 Phaseolus vulgaris
Phvul.008G255300 0.5kb downstream 0.5kb downstream 3999 true Chr08: 60312941-60316939 Phaseolus vulgaris
Phvul.008G255300 0.5kb downstream 0.5kb downstream 500 false Chr08: 60312941-60313440 Phaseolus vulgaris
Phvul.008G255300 1.0kb upstream 1.0kb upstream 4499 true Chr08: 60313441-60317939 Phaseolus vulgaris
Phvul.008G255300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 60316940-60317939 Phaseolus vulgaris
Phvul.008G255300 1.0kb downstream 1.0kb downstream 4499 true Chr08: 60312441-60316939 Phaseolus vulgaris
Phvul.008G255300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 60312441-60313440 Phaseolus vulgaris
Phvul.008G255300 2.0kb upstream 2.0kb upstream 5499 true Chr08: 60313441-60318939 Phaseolus vulgaris
Phvul.008G255300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 60316940-60318939 Phaseolus vulgaris
Phvul.008G255300 2.0kb downstream 2.0kb downstream 5499 true Chr08: 60311441-60316939 Phaseolus vulgaris
Phvul.008G255300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 60311441-60313440 Phaseolus vulgaris
Phvul.008G255300 5.0kb upstream 5.0kb upstream 8499 true Chr08: 60313441-60321939 Phaseolus vulgaris
Phvul.008G255300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 60316940-60321939 Phaseolus vulgaris
Phvul.008G255300 5.0kb downstream 5.0kb downstream 8499 true Chr08: 60308441-60316939 Phaseolus vulgaris
Phvul.008G255300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 60308441-60313440 Phaseolus vulgaris
Phvul.008G255300 10.0kb upstream 10.0kb upstream 13499 true Chr08: 60313441-60326939 Phaseolus vulgaris
Phvul.008G255300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 60316940-60326939 Phaseolus vulgaris
Phvul.008G255300 10.0kb downstream 10.0kb downstream 13499 true Chr08: 60303441-60316939 Phaseolus vulgaris
Phvul.008G255300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 60303441-60313440 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041437 5273 Angiosperm View MSA
122304127 5265 Fabidae View MSA
124067612 5270 Rosid View MSA
123741790 5271 Pentapetalae View MSA
122786128 5272 Eudicot View MSA
121350497 5274 Embryophyte View MSA
123381757 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.3102 0.0 60.2812   Low
cufflinks 66.1335 0.0 177.944 High  
cufflinks 115.589 0.0 330.981 High  
cufflinks 79.9384 0.0 217.277 High  
cufflinks 60.4251 0.0 160.443 High  
cufflinks 112.666 0.0 320.207 High  
cufflinks 92.6488 0.0 256.966 High  
cufflinks 56.9027 0.0 151.483 High  
cufflinks 120.632 0.0 343.916 High High
cufflinks 42.3487 0.0 110.577 High Low
cufflinks 92.2165 0.0 254.494 High  

0 Strain