Gene : Phvul.008G259200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11040:SF26 - ZINC TRANSPORTER 6, CHLOROPLASTIC Genomic Order:  2607
Name:  ? Phvul.008G259200 Secondary Identifier:  ? PAC:37158956
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G259200 0.5kb upstream 0.5kb upstream 2918 true Chr08: 60614753-60617670 Phaseolus vulgaris
Phvul.008G259200 0.5kb upstream 0.5kb upstream 500 false Chr08: 60614753-60615252 Phaseolus vulgaris
Phvul.008G259200 0.5kb downstream 0.5kb downstream 2918 true Chr08: 60615253-60618170 Phaseolus vulgaris
Phvul.008G259200 0.5kb downstream 0.5kb downstream 500 false Chr08: 60617671-60618170 Phaseolus vulgaris
Phvul.008G259200 1.0kb upstream 1.0kb upstream 3418 true Chr08: 60614253-60617670 Phaseolus vulgaris
Phvul.008G259200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 60614253-60615252 Phaseolus vulgaris
Phvul.008G259200 1.0kb downstream 1.0kb downstream 3418 true Chr08: 60615253-60618670 Phaseolus vulgaris
Phvul.008G259200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 60617671-60618670 Phaseolus vulgaris
Phvul.008G259200 2.0kb upstream 2.0kb upstream 4418 true Chr08: 60613253-60617670 Phaseolus vulgaris
Phvul.008G259200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 60613253-60615252 Phaseolus vulgaris
Phvul.008G259200 2.0kb downstream 2.0kb downstream 4418 true Chr08: 60615253-60619670 Phaseolus vulgaris
Phvul.008G259200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 60617671-60619670 Phaseolus vulgaris
Phvul.008G259200 5.0kb upstream 5.0kb upstream 7418 true Chr08: 60610253-60617670 Phaseolus vulgaris
Phvul.008G259200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 60610253-60615252 Phaseolus vulgaris
Phvul.008G259200 5.0kb downstream 5.0kb downstream 7418 true Chr08: 60615253-60622670 Phaseolus vulgaris
Phvul.008G259200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 60617671-60622670 Phaseolus vulgaris
Phvul.008G259200 10.0kb upstream 10.0kb upstream 12418 true Chr08: 60605253-60617670 Phaseolus vulgaris
Phvul.008G259200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 60605253-60615252 Phaseolus vulgaris
Phvul.008G259200 10.0kb downstream 10.0kb downstream 12418 true Chr08: 60615253-60627670 Phaseolus vulgaris
Phvul.008G259200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 60617671-60627670 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311718 5265 Fabidae View MSA
124065982 5270 Rosid View MSA
123741321 5271 Pentapetalae View MSA
122790918 5272 Eudicot View MSA
122046721 5273 Angiosperm View MSA
121310647 5274 Embryophyte View MSA
123428132 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.92 0.0 47.1175    
cufflinks 12.9672 0.0 34.9951    
cufflinks 6.2476 0.0 18.2318   Low
cufflinks 15.0225 0.0 39.9597    
cufflinks 12.9711 0.0 34.884    
cufflinks 4.04724 0.0 12.3259   Low
cufflinks 15.4951 0.0 41.1299    
cufflinks 7.82146 0.0 22.1739    
cufflinks 15.5541 0.0 41.3493    
cufflinks 36.8652 0.0 95.3576 High High
cufflinks 16.2673 0.0 42.9069    

0 Strain