Gene : Phvul.008G248500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31161:SF9 - MYB FAMILY TRANSCRIPTION FACTOR-RELATED Genomic Order:  2496
Name:  ? Phvul.008G248500 Secondary Identifier:  ? PAC:37157741
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G248500 0.5kb upstream 0.5kb upstream 2663 true Chr08: 59751507-59754169 Phaseolus vulgaris
Phvul.008G248500 0.5kb upstream 0.5kb upstream 500 false Chr08: 59753670-59754169 Phaseolus vulgaris
Phvul.008G248500 0.5kb downstream 0.5kb downstream 2663 true Chr08: 59751007-59753669 Phaseolus vulgaris
Phvul.008G248500 0.5kb downstream 0.5kb downstream 500 false Chr08: 59751007-59751506 Phaseolus vulgaris
Phvul.008G248500 1.0kb upstream 1.0kb upstream 3163 true Chr08: 59751507-59754669 Phaseolus vulgaris
Phvul.008G248500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 59753670-59754669 Phaseolus vulgaris
Phvul.008G248500 1.0kb downstream 1.0kb downstream 3163 true Chr08: 59750507-59753669 Phaseolus vulgaris
Phvul.008G248500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 59750507-59751506 Phaseolus vulgaris
Phvul.008G248500 2.0kb upstream 2.0kb upstream 4163 true Chr08: 59751507-59755669 Phaseolus vulgaris
Phvul.008G248500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 59753670-59755669 Phaseolus vulgaris
Phvul.008G248500 2.0kb downstream 2.0kb downstream 4163 true Chr08: 59749507-59753669 Phaseolus vulgaris
Phvul.008G248500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 59749507-59751506 Phaseolus vulgaris
Phvul.008G248500 5.0kb upstream 5.0kb upstream 7163 true Chr08: 59751507-59758669 Phaseolus vulgaris
Phvul.008G248500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 59753670-59758669 Phaseolus vulgaris
Phvul.008G248500 5.0kb downstream 5.0kb downstream 7163 true Chr08: 59746507-59753669 Phaseolus vulgaris
Phvul.008G248500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 59746507-59751506 Phaseolus vulgaris
Phvul.008G248500 10.0kb upstream 10.0kb upstream 12163 true Chr08: 59751507-59763669 Phaseolus vulgaris
Phvul.008G248500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 59753670-59763669 Phaseolus vulgaris
Phvul.008G248500 10.0kb downstream 10.0kb downstream 12163 true Chr08: 59741507-59753669 Phaseolus vulgaris
Phvul.008G248500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 59741507-59751506 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041109 5273 Angiosperm View MSA
122304785 5265 Fabidae View MSA
124064348 5270 Rosid View MSA
123740612 5271 Pentapetalae View MSA
122790219 5272 Eudicot View MSA
121351569 5274 Embryophyte View MSA
123382231 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.32473 0.0 7.0284    
cufflinks 4.55584 0.0 19.6874   High
cufflinks 0.0650931 0.0 0.286986 Low Low
cufflinks 0.374751 0.0 1.42502 Low  
cufflinks 0.898054 0.0 5.14687    
cufflinks 2.17222 0.0 9.67885    
cufflinks 2.45757 0.0 8.2008    
cufflinks 1.16246 0.0 4.5597    
cufflinks 2.80371 0.0 11.726    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.01395 0.0 5.5789    

0 Strain