Gene : Phvul.008G240800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31867:SF3 - EXPANSIN-A13 Genomic Order:  2420
Name:  ? Phvul.008G240800 Secondary Identifier:  ? PAC:37161531
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G240800 0.5kb upstream 0.5kb upstream 2798 true Chr08: 58962222-58965019 Phaseolus vulgaris
Phvul.008G240800 0.5kb upstream 0.5kb upstream 500 false Chr08: 58962222-58962721 Phaseolus vulgaris
Phvul.008G240800 0.5kb downstream 0.5kb downstream 2798 true Chr08: 58962722-58965519 Phaseolus vulgaris
Phvul.008G240800 0.5kb downstream 0.5kb downstream 500 false Chr08: 58965020-58965519 Phaseolus vulgaris
Phvul.008G240800 1.0kb upstream 1.0kb upstream 3298 true Chr08: 58961722-58965019 Phaseolus vulgaris
Phvul.008G240800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 58961722-58962721 Phaseolus vulgaris
Phvul.008G240800 1.0kb downstream 1.0kb downstream 3298 true Chr08: 58962722-58966019 Phaseolus vulgaris
Phvul.008G240800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 58965020-58966019 Phaseolus vulgaris
Phvul.008G240800 2.0kb upstream 2.0kb upstream 4298 true Chr08: 58960722-58965019 Phaseolus vulgaris
Phvul.008G240800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 58960722-58962721 Phaseolus vulgaris
Phvul.008G240800 2.0kb downstream 2.0kb downstream 4298 true Chr08: 58962722-58967019 Phaseolus vulgaris
Phvul.008G240800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 58965020-58967019 Phaseolus vulgaris
Phvul.008G240800 5.0kb upstream 5.0kb upstream 7298 true Chr08: 58957722-58965019 Phaseolus vulgaris
Phvul.008G240800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 58957722-58962721 Phaseolus vulgaris
Phvul.008G240800 5.0kb downstream 5.0kb downstream 7298 true Chr08: 58962722-58970019 Phaseolus vulgaris
Phvul.008G240800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 58965020-58970019 Phaseolus vulgaris
Phvul.008G240800 10.0kb upstream 10.0kb upstream 12298 true Chr08: 58952722-58965019 Phaseolus vulgaris
Phvul.008G240800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 58952722-58962721 Phaseolus vulgaris
Phvul.008G240800 10.0kb downstream 10.0kb downstream 12298 true Chr08: 58962722-58975019 Phaseolus vulgaris
Phvul.008G240800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 58965020-58975019 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304401 5265 Fabidae View MSA
124061615 5270 Rosid View MSA
123746743 5271 Pentapetalae View MSA
122791118 5272 Eudicot View MSA
122045799 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121310504 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.86611 0.0 14.2991   Low
cufflinks 19.1261 0.0 50.1105    
cufflinks 6.50545 0.0 18.7205   Low
cufflinks 22.9089 0.0 59.4379   High
cufflinks 17.4716 0.0 45.8785    
cufflinks 13.0051 0.0 34.9764    
cufflinks 10.9656 0.0 29.71    
cufflinks 7.358 0.0 20.7736    
cufflinks 10.9133 0.0 29.6079    
cufflinks 23.4021 0.0 60.7585   High
cufflinks 26.4974 0.0 68.5766   High

0 Strain