Gene : Phvul.008G242400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31384:SF2 - AUXIN RESPONSE FACTOR 8 Genomic Order:  2435
Name:  ? Phvul.008G242400 Secondary Identifier:  ? PAC:37159023
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G242400 0.5kb upstream 0.5kb upstream 11502 true Chr08: 59095034-59106535 Phaseolus vulgaris
Phvul.008G242400 0.5kb upstream 0.5kb upstream 500 false Chr08: 59095034-59095533 Phaseolus vulgaris
Phvul.008G242400 0.5kb downstream 0.5kb downstream 11502 true Chr08: 59095534-59107035 Phaseolus vulgaris
Phvul.008G242400 0.5kb downstream 0.5kb downstream 500 false Chr08: 59106536-59107035 Phaseolus vulgaris
Phvul.008G242400 1.0kb upstream 1.0kb upstream 12002 true Chr08: 59094534-59106535 Phaseolus vulgaris
Phvul.008G242400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 59094534-59095533 Phaseolus vulgaris
Phvul.008G242400 1.0kb downstream 1.0kb downstream 12002 true Chr08: 59095534-59107535 Phaseolus vulgaris
Phvul.008G242400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 59106536-59107535 Phaseolus vulgaris
Phvul.008G242400 2.0kb upstream 2.0kb upstream 13002 true Chr08: 59093534-59106535 Phaseolus vulgaris
Phvul.008G242400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 59093534-59095533 Phaseolus vulgaris
Phvul.008G242400 2.0kb downstream 2.0kb downstream 13002 true Chr08: 59095534-59108535 Phaseolus vulgaris
Phvul.008G242400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 59106536-59108535 Phaseolus vulgaris
Phvul.008G242400 5.0kb upstream 5.0kb upstream 16002 true Chr08: 59090534-59106535 Phaseolus vulgaris
Phvul.008G242400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 59090534-59095533 Phaseolus vulgaris
Phvul.008G242400 5.0kb downstream 5.0kb downstream 16002 true Chr08: 59095534-59111535 Phaseolus vulgaris
Phvul.008G242400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 59106536-59111535 Phaseolus vulgaris
Phvul.008G242400 10.0kb upstream 10.0kb upstream 21002 true Chr08: 59085534-59106535 Phaseolus vulgaris
Phvul.008G242400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 59085534-59095533 Phaseolus vulgaris
Phvul.008G242400 10.0kb downstream 10.0kb downstream 21002 true Chr08: 59095534-59116535 Phaseolus vulgaris
Phvul.008G242400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 59106536-59116535 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309845 5265 Fabidae View MSA
124073389 5270 Rosid View MSA
123749111 5271 Pentapetalae View MSA
122793528 5272 Eudicot View MSA
122048595 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.3021 0.0 31.8017    
cufflinks 41.2789 0.0 114.586 High  
cufflinks 40.1423 0.0 111.198 High  
cufflinks 23.5327 0.0 62.0457    
cufflinks 36.0364 0.0 98.5331 High  
cufflinks 34.5309 0.0 94.1601 High  
cufflinks 12.0076 0.0 31.0407    
cufflinks 6.36338 0.0 16.7089   Low
cufflinks 12.7849 0.0 33.0594    
cufflinks 41.8946 0.0 116.412 High  
cufflinks 38.5024 0.0 105.937 High  

0 Strain