Gene : Phvul.008G223800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12210:SF57 - HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN Genomic Order:  2277
Name:  ? Phvul.008G223800 Secondary Identifier:  ? PAC:37161369
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G223800 0.5kb upstream 0.5kb upstream 4924 true Chr08: 57381013-57385936 Phaseolus vulgaris
Phvul.008G223800 0.5kb upstream 0.5kb upstream 500 false Chr08: 57381013-57381512 Phaseolus vulgaris
Phvul.008G223800 0.5kb downstream 0.5kb downstream 4924 true Chr08: 57381513-57386436 Phaseolus vulgaris
Phvul.008G223800 0.5kb downstream 0.5kb downstream 500 false Chr08: 57385937-57386436 Phaseolus vulgaris
Phvul.008G223800 1.0kb upstream 1.0kb upstream 5424 true Chr08: 57380513-57385936 Phaseolus vulgaris
Phvul.008G223800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 57380513-57381512 Phaseolus vulgaris
Phvul.008G223800 1.0kb downstream 1.0kb downstream 5424 true Chr08: 57381513-57386936 Phaseolus vulgaris
Phvul.008G223800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 57385937-57386936 Phaseolus vulgaris
Phvul.008G223800 2.0kb upstream 2.0kb upstream 6424 true Chr08: 57379513-57385936 Phaseolus vulgaris
Phvul.008G223800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 57379513-57381512 Phaseolus vulgaris
Phvul.008G223800 2.0kb downstream 2.0kb downstream 6424 true Chr08: 57381513-57387936 Phaseolus vulgaris
Phvul.008G223800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 57385937-57387936 Phaseolus vulgaris
Phvul.008G223800 5.0kb upstream 5.0kb upstream 9424 true Chr08: 57376513-57385936 Phaseolus vulgaris
Phvul.008G223800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 57376513-57381512 Phaseolus vulgaris
Phvul.008G223800 5.0kb downstream 5.0kb downstream 9424 true Chr08: 57381513-57390936 Phaseolus vulgaris
Phvul.008G223800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 57385937-57390936 Phaseolus vulgaris
Phvul.008G223800 10.0kb upstream 10.0kb upstream 14424 true Chr08: 57371513-57385936 Phaseolus vulgaris
Phvul.008G223800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 57371513-57381512 Phaseolus vulgaris
Phvul.008G223800 10.0kb downstream 10.0kb downstream 14424 true Chr08: 57381513-57395936 Phaseolus vulgaris
Phvul.008G223800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 57385937-57395936 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304199 5265 Fabidae View MSA
124073385 5270 Rosid View MSA
123737180 5271 Pentapetalae View MSA
122791950 5272 Eudicot View MSA
122050524 5273 Angiosperm View MSA
123429149 5275 Viridiplantae View MSA
121311967 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 96.4089 0.0 306.745 High High
cufflinks 36.9099 0.0 103.468 High  
cufflinks 47.1907 0.0 133.271 High  
cufflinks 41.8525 0.0 116.898 High  
cufflinks 59.9162 0.0 174.071 High  
cufflinks 21.4934 0.0 61.0648   Low
cufflinks 44.5462 0.0 125.239 High  
cufflinks 34.5817 0.0 96.5975 High  
cufflinks 57.3725 0.0 165.422 High  
cufflinks 103.733 0.0 430.159 High High
cufflinks 54.2897 0.0 196.454 High  

0 Strain