Gene : Phvul.008G226600 P. vulgaris v2.1
Defline:  (1 of 6) PTHR24078:SF261 - DNAJ (HSP40) HOMOLOG, SUBFAMILY A, MEMBER 3A Genomic Order:  2305
Name:  ? Phvul.008G226600 Secondary Identifier:  ? PAC:37159949
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G226600 0.5kb upstream 0.5kb upstream 2672 true Chr08: 57691052-57693723 Phaseolus vulgaris
Phvul.008G226600 0.5kb upstream 0.5kb upstream 500 false Chr08: 57693224-57693723 Phaseolus vulgaris
Phvul.008G226600 0.5kb downstream 0.5kb downstream 2672 true Chr08: 57690552-57693223 Phaseolus vulgaris
Phvul.008G226600 0.5kb downstream 0.5kb downstream 500 false Chr08: 57690552-57691051 Phaseolus vulgaris
Phvul.008G226600 1.0kb upstream 1.0kb upstream 3172 true Chr08: 57691052-57694223 Phaseolus vulgaris
Phvul.008G226600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 57693224-57694223 Phaseolus vulgaris
Phvul.008G226600 1.0kb downstream 1.0kb downstream 3172 true Chr08: 57690052-57693223 Phaseolus vulgaris
Phvul.008G226600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 57690052-57691051 Phaseolus vulgaris
Phvul.008G226600 2.0kb upstream 2.0kb upstream 4172 true Chr08: 57691052-57695223 Phaseolus vulgaris
Phvul.008G226600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 57693224-57695223 Phaseolus vulgaris
Phvul.008G226600 2.0kb downstream 2.0kb downstream 4172 true Chr08: 57689052-57693223 Phaseolus vulgaris
Phvul.008G226600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 57689052-57691051 Phaseolus vulgaris
Phvul.008G226600 5.0kb upstream 5.0kb upstream 7172 true Chr08: 57691052-57698223 Phaseolus vulgaris
Phvul.008G226600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 57693224-57698223 Phaseolus vulgaris
Phvul.008G226600 5.0kb downstream 5.0kb downstream 7172 true Chr08: 57686052-57693223 Phaseolus vulgaris
Phvul.008G226600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 57686052-57691051 Phaseolus vulgaris
Phvul.008G226600 10.0kb upstream 10.0kb upstream 12172 true Chr08: 57691052-57703223 Phaseolus vulgaris
Phvul.008G226600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 57693224-57703223 Phaseolus vulgaris
Phvul.008G226600 10.0kb downstream 10.0kb downstream 12172 true Chr08: 57681052-57693223 Phaseolus vulgaris
Phvul.008G226600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 57681052-57691051 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792864 5273 Angiosperm View MSA
122309778 5265 Fabidae View MSA
124064393 5270 Rosid View MSA
123746723 5271 Pentapetalae View MSA
122798692 5272 Eudicot View MSA
121064059 5274 Embryophyte View MSA
123426863 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.1074 0.0 62.4794    
cufflinks 6.70624 0.0 19.0014   Low
cufflinks 18.4631 0.0 48.1896    
cufflinks 16.8948 0.0 44.5718    
cufflinks 39.402 0.0 101.991 High High
cufflinks 4.05115 0.0 12.1   Low
cufflinks 30.1908 0.0 78.0381 High  
cufflinks 17.3901 0.0 45.5222    
cufflinks 25.6457 0.0 66.4012    
cufflinks 33.9806 0.0 87.8563    
cufflinks 32.666 0.0 84.4357    

0 Strain