Gene : Phvul.008G232000 P. vulgaris v2.1
Defline:  (1 of 2) K11672 - actin-related protein 5 (ACTR5, ARP5, INO80M) Genomic Order:  1957
Name:  ? Phvul.008G232000 Secondary Identifier:  ? PAC:37158641
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G232000 0.5kb upstream 0.5kb upstream 7717 true Chr08: 53504813-53512529 Phaseolus vulgaris
Phvul.008G232000 0.5kb upstream 0.5kb upstream 500 false Chr08: 53512030-53512529 Phaseolus vulgaris
Phvul.008G232000 0.5kb downstream 0.5kb downstream 7717 true Chr08: 53504313-53512029 Phaseolus vulgaris
Phvul.008G232000 0.5kb downstream 0.5kb downstream 500 false Chr08: 53504313-53504812 Phaseolus vulgaris
Phvul.008G232000 1.0kb upstream 1.0kb upstream 8217 true Chr08: 53504813-53513029 Phaseolus vulgaris
Phvul.008G232000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 53512030-53513029 Phaseolus vulgaris
Phvul.008G232000 1.0kb downstream 1.0kb downstream 8217 true Chr08: 53503813-53512029 Phaseolus vulgaris
Phvul.008G232000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 53503813-53504812 Phaseolus vulgaris
Phvul.008G232000 2.0kb upstream 2.0kb upstream 9217 true Chr08: 53504813-53514029 Phaseolus vulgaris
Phvul.008G232000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 53512030-53514029 Phaseolus vulgaris
Phvul.008G232000 2.0kb downstream 2.0kb downstream 9217 true Chr08: 53502813-53512029 Phaseolus vulgaris
Phvul.008G232000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 53502813-53504812 Phaseolus vulgaris
Phvul.008G232000 5.0kb upstream 5.0kb upstream 12217 true Chr08: 53504813-53517029 Phaseolus vulgaris
Phvul.008G232000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 53512030-53517029 Phaseolus vulgaris
Phvul.008G232000 5.0kb downstream 5.0kb downstream 12217 true Chr08: 53499813-53512029 Phaseolus vulgaris
Phvul.008G232000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 53499813-53504812 Phaseolus vulgaris
Phvul.008G232000 10.0kb upstream 10.0kb upstream 17217 true Chr08: 53504813-53522029 Phaseolus vulgaris
Phvul.008G232000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 53512030-53522029 Phaseolus vulgaris
Phvul.008G232000 10.0kb downstream 10.0kb downstream 17217 true Chr08: 53494813-53512029 Phaseolus vulgaris
Phvul.008G232000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 53494813-53504812 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026482 5273 Angiosperm View MSA
122254037 5265 Fabidae View MSA
123996375 5270 Rosid View MSA
123742695 5271 Pentapetalae View MSA
122791684 5272 Eudicot View MSA
121345083 5274 Embryophyte View MSA
123380152 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.37111 0.0 12.0251   Low
cufflinks 8.42118 0.0 22.073    
cufflinks 6.9468 0.0 18.3957    
cufflinks 2.78965 0.0 8.05453   Low
cufflinks 7.19994 0.0 19.136    
cufflinks 8.14376 0.0 21.3651    
cufflinks 8.5371 0.0 22.3273    
cufflinks 9.69996 0.0 25.2115    
cufflinks 7.92853 0.0 20.8323    
cufflinks 10.6184 0.0 27.5825   High
cufflinks 6.86335 0.0 18.2614    

0 Strain