Gene : Phvul.008G231728 P. vulgaris v2.1
Genomic Order:  1964 Name:  ? Phvul.008G231728
Secondary Identifier:  ? PAC:37159092
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G231728 0.5kb upstream 0.5kb upstream 6606 true Chr08: 53556672-53563277 Phaseolus vulgaris
Phvul.008G231728 0.5kb upstream 0.5kb upstream 500 false Chr08: 53562778-53563277 Phaseolus vulgaris
Phvul.008G231728 0.5kb downstream 0.5kb downstream 6606 true Chr08: 53556172-53562777 Phaseolus vulgaris
Phvul.008G231728 0.5kb downstream 0.5kb downstream 500 false Chr08: 53556172-53556671 Phaseolus vulgaris
Phvul.008G231728 1.0kb upstream 1.0kb upstream 7106 true Chr08: 53556672-53563777 Phaseolus vulgaris
Phvul.008G231728 1.0kb upstream 1.0kb upstream 1000 false Chr08: 53562778-53563777 Phaseolus vulgaris
Phvul.008G231728 1.0kb downstream 1.0kb downstream 7106 true Chr08: 53555672-53562777 Phaseolus vulgaris
Phvul.008G231728 1.0kb downstream 1.0kb downstream 1000 false Chr08: 53555672-53556671 Phaseolus vulgaris
Phvul.008G231728 2.0kb upstream 2.0kb upstream 8106 true Chr08: 53556672-53564777 Phaseolus vulgaris
Phvul.008G231728 2.0kb upstream 2.0kb upstream 2000 false Chr08: 53562778-53564777 Phaseolus vulgaris
Phvul.008G231728 2.0kb downstream 2.0kb downstream 8106 true Chr08: 53554672-53562777 Phaseolus vulgaris
Phvul.008G231728 2.0kb downstream 2.0kb downstream 2000 false Chr08: 53554672-53556671 Phaseolus vulgaris
Phvul.008G231728 5.0kb upstream 5.0kb upstream 11106 true Chr08: 53556672-53567777 Phaseolus vulgaris
Phvul.008G231728 5.0kb upstream 5.0kb upstream 5000 false Chr08: 53562778-53567777 Phaseolus vulgaris
Phvul.008G231728 5.0kb downstream 5.0kb downstream 11106 true Chr08: 53551672-53562777 Phaseolus vulgaris
Phvul.008G231728 5.0kb downstream 5.0kb downstream 5000 false Chr08: 53551672-53556671 Phaseolus vulgaris
Phvul.008G231728 10.0kb upstream 10.0kb upstream 16106 true Chr08: 53556672-53572777 Phaseolus vulgaris
Phvul.008G231728 10.0kb upstream 10.0kb upstream 10000 false Chr08: 53562778-53572777 Phaseolus vulgaris
Phvul.008G231728 10.0kb downstream 10.0kb downstream 16106 true Chr08: 53546672-53562777 Phaseolus vulgaris
Phvul.008G231728 10.0kb downstream 10.0kb downstream 10000 false Chr08: 53546672-53556671 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026281 5273 Angiosperm View MSA
122299734 5265 Fabidae View MSA
124063464 5270 Rosid View MSA
123749655 5271 Pentapetalae View MSA
122786969 5272 Eudicot View MSA
121348524 5274 Embryophyte View MSA
123380897 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.39878 0.0 10.9524    
cufflinks 2.47961 0.0 13.2171    
cufflinks 7.11774 0.0 28.7041   High
cufflinks 1.00043 0.0 7.72403   Low
cufflinks 1.18988 0.0 7.44122    
cufflinks 5.06328 0.0 22.2825   High
cufflinks 1.89213 0.0 9.07071    
cufflinks 2.66419 0.0 13.6    
cufflinks 1.56149 0.0 9.23573    
cufflinks 3.02899 0.0 15.8708    
cufflinks 0.953717 0.0 7.1117   Low

0 Strain