Gene : Phvul.008G217800 P. vulgaris v2.1
Defline:  (1 of 4) K02892 - large subunit ribosomal protein L23 (RP-L23, MRPL23, rplW) Genomic Order:  2217
Name:  ? Phvul.008G217800 Secondary Identifier:  ? PAC:37161354
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G217800 0.5kb upstream 0.5kb upstream 1069 true Chr08: 56702662-56703730 Phaseolus vulgaris
Phvul.008G217800 0.5kb upstream 0.5kb upstream 500 false Chr08: 56702662-56703161 Phaseolus vulgaris
Phvul.008G217800 0.5kb downstream 0.5kb downstream 1069 true Chr08: 56703162-56704230 Phaseolus vulgaris
Phvul.008G217800 0.5kb downstream 0.5kb downstream 500 false Chr08: 56703731-56704230 Phaseolus vulgaris
Phvul.008G217800 1.0kb upstream 1.0kb upstream 1569 true Chr08: 56702162-56703730 Phaseolus vulgaris
Phvul.008G217800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 56702162-56703161 Phaseolus vulgaris
Phvul.008G217800 1.0kb downstream 1.0kb downstream 1569 true Chr08: 56703162-56704730 Phaseolus vulgaris
Phvul.008G217800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 56703731-56704730 Phaseolus vulgaris
Phvul.008G217800 2.0kb upstream 2.0kb upstream 2569 true Chr08: 56701162-56703730 Phaseolus vulgaris
Phvul.008G217800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 56701162-56703161 Phaseolus vulgaris
Phvul.008G217800 2.0kb downstream 2.0kb downstream 2569 true Chr08: 56703162-56705730 Phaseolus vulgaris
Phvul.008G217800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 56703731-56705730 Phaseolus vulgaris
Phvul.008G217800 5.0kb upstream 5.0kb upstream 5569 true Chr08: 56698162-56703730 Phaseolus vulgaris
Phvul.008G217800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 56698162-56703161 Phaseolus vulgaris
Phvul.008G217800 5.0kb downstream 5.0kb downstream 5569 true Chr08: 56703162-56708730 Phaseolus vulgaris
Phvul.008G217800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 56703731-56708730 Phaseolus vulgaris
Phvul.008G217800 10.0kb upstream 10.0kb upstream 10569 true Chr08: 56693162-56703730 Phaseolus vulgaris
Phvul.008G217800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 56693162-56703161 Phaseolus vulgaris
Phvul.008G217800 10.0kb downstream 10.0kb downstream 10569 true Chr08: 56703162-56713730 Phaseolus vulgaris
Phvul.008G217800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 56703731-56713730 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299568 5265 Fabidae View MSA
124068912 5270 Rosid View MSA
123740865 5271 Pentapetalae View MSA
122789044 5272 Eudicot View MSA
122044444 5273 Angiosperm View MSA
121349805 5274 Embryophyte View MSA
123426659 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.0809 0.0 79.6068    
cufflinks 48.223 0.0 126.841 High High
cufflinks 21.7669 0.0 61.2963   Low
cufflinks 47.7 0.0 125.401 High High
cufflinks 36.8997 0.0 99.2107 High  
cufflinks 22.9328 0.0 63.9998   Low
cufflinks 29.87 0.0 80.9306 High  
cufflinks 36.4133 0.0 97.5462 High  
cufflinks 30.0709 0.0 81.3295    
cufflinks 32.2671 0.0 87.6024    
cufflinks 39.1643 0.0 104.229 High  

0 Strain