Gene : Phvul.008G206100 P. vulgaris v2.1
Defline:  (1 of 4) K07199 - 5'-AMP-activated protein kinase, regulatory beta subunit (PRKAB) Genomic Order:  2101
Name:  ? Phvul.008G206100 Secondary Identifier:  ? PAC:37159755
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G206100 0.5kb upstream 0.5kb upstream 5677 true Chr08: 55381672-55387348 Phaseolus vulgaris
Phvul.008G206100 0.5kb upstream 0.5kb upstream 500 false Chr08: 55386849-55387348 Phaseolus vulgaris
Phvul.008G206100 0.5kb downstream 0.5kb downstream 5677 true Chr08: 55381172-55386848 Phaseolus vulgaris
Phvul.008G206100 0.5kb downstream 0.5kb downstream 500 false Chr08: 55381172-55381671 Phaseolus vulgaris
Phvul.008G206100 1.0kb upstream 1.0kb upstream 6177 true Chr08: 55381672-55387848 Phaseolus vulgaris
Phvul.008G206100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 55386849-55387848 Phaseolus vulgaris
Phvul.008G206100 1.0kb downstream 1.0kb downstream 6177 true Chr08: 55380672-55386848 Phaseolus vulgaris
Phvul.008G206100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 55380672-55381671 Phaseolus vulgaris
Phvul.008G206100 2.0kb upstream 2.0kb upstream 7177 true Chr08: 55381672-55388848 Phaseolus vulgaris
Phvul.008G206100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 55386849-55388848 Phaseolus vulgaris
Phvul.008G206100 2.0kb downstream 2.0kb downstream 7177 true Chr08: 55379672-55386848 Phaseolus vulgaris
Phvul.008G206100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 55379672-55381671 Phaseolus vulgaris
Phvul.008G206100 5.0kb upstream 5.0kb upstream 10177 true Chr08: 55381672-55391848 Phaseolus vulgaris
Phvul.008G206100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 55386849-55391848 Phaseolus vulgaris
Phvul.008G206100 5.0kb downstream 5.0kb downstream 10177 true Chr08: 55376672-55386848 Phaseolus vulgaris
Phvul.008G206100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 55376672-55381671 Phaseolus vulgaris
Phvul.008G206100 10.0kb upstream 10.0kb upstream 15177 true Chr08: 55381672-55396848 Phaseolus vulgaris
Phvul.008G206100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 55386849-55396848 Phaseolus vulgaris
Phvul.008G206100 10.0kb downstream 10.0kb downstream 15177 true Chr08: 55371672-55386848 Phaseolus vulgaris
Phvul.008G206100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 55371672-55381671 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314668 5265 Fabidae View MSA
124068793 5270 Rosid View MSA
123737667 5271 Pentapetalae View MSA
122785894 5272 Eudicot View MSA
122041753 5273 Angiosperm View MSA
121345261 5274 Embryophyte View MSA
123426874 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.7866 0.0 140.259 High High
cufflinks 27.1456 0.0 98.0917    
cufflinks 29.2043 0.0 104.409    
cufflinks 15.3682 0.0 54.0574   Low
cufflinks 41.9486 0.0 147.699 High High
cufflinks 19.4912 0.0 73.4654   Low
cufflinks 19.0379 0.0 71.9121   Low
cufflinks 32.398 0.0 115.083 High  
cufflinks 32.4075 0.0 115.501 High  
cufflinks 34.9217 0.0 124.052    
cufflinks 37.271 0.0 131.533 High  

0 Strain