Gene : Phvul.008G210900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12555//PTHR12555:SF14 - UBIQUITIN FUSION DEGRADATON PROTEIN 1 // SUBFAMILY NOT NAMED Genomic Order:  2148
Name:  ? Phvul.008G210900 Secondary Identifier:  ? PAC:37161300
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G210900 0.5kb upstream 0.5kb upstream 5063 true Chr08: 55930413-55935475 Phaseolus vulgaris
Phvul.008G210900 0.5kb upstream 0.5kb upstream 500 false Chr08: 55934976-55935475 Phaseolus vulgaris
Phvul.008G210900 0.5kb downstream 0.5kb downstream 5063 true Chr08: 55929913-55934975 Phaseolus vulgaris
Phvul.008G210900 0.5kb downstream 0.5kb downstream 500 false Chr08: 55929913-55930412 Phaseolus vulgaris
Phvul.008G210900 1.0kb upstream 1.0kb upstream 5563 true Chr08: 55930413-55935975 Phaseolus vulgaris
Phvul.008G210900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 55934976-55935975 Phaseolus vulgaris
Phvul.008G210900 1.0kb downstream 1.0kb downstream 5563 true Chr08: 55929413-55934975 Phaseolus vulgaris
Phvul.008G210900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 55929413-55930412 Phaseolus vulgaris
Phvul.008G210900 2.0kb upstream 2.0kb upstream 6563 true Chr08: 55930413-55936975 Phaseolus vulgaris
Phvul.008G210900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 55934976-55936975 Phaseolus vulgaris
Phvul.008G210900 2.0kb downstream 2.0kb downstream 6563 true Chr08: 55928413-55934975 Phaseolus vulgaris
Phvul.008G210900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 55928413-55930412 Phaseolus vulgaris
Phvul.008G210900 5.0kb upstream 5.0kb upstream 9563 true Chr08: 55930413-55939975 Phaseolus vulgaris
Phvul.008G210900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 55934976-55939975 Phaseolus vulgaris
Phvul.008G210900 5.0kb downstream 5.0kb downstream 9563 true Chr08: 55925413-55934975 Phaseolus vulgaris
Phvul.008G210900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 55925413-55930412 Phaseolus vulgaris
Phvul.008G210900 10.0kb upstream 10.0kb upstream 14563 true Chr08: 55930413-55944975 Phaseolus vulgaris
Phvul.008G210900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 55934976-55944975 Phaseolus vulgaris
Phvul.008G210900 10.0kb downstream 10.0kb downstream 14563 true Chr08: 55920413-55934975 Phaseolus vulgaris
Phvul.008G210900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 55920413-55930412 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304650 5265 Fabidae View MSA
124065261 5270 Rosid View MSA
123736611 5271 Pentapetalae View MSA
122787635 5272 Eudicot View MSA
122046586 5273 Angiosperm View MSA
121347183 5274 Embryophyte View MSA
123428055 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.7909 0.0 48.6154   High
cufflinks 9.48187 0.0 25.2564    
cufflinks 8.17061 0.0 21.9499   Low
cufflinks 10.4695 0.0 27.8662    
cufflinks 7.00392 0.0 19.2388   Low
cufflinks 10.0923 0.0 26.7395    
cufflinks 11.9771 0.0 31.4193    
cufflinks 10.7657 0.0 28.3195    
cufflinks 10.8986 0.0 28.7809    
cufflinks 11.8767 0.0 31.2307    
cufflinks 9.47037 0.0 25.3323    

0 Strain