Gene : Phvul.008G203200 P. vulgaris v2.1
Defline:  (1 of 1) K11886 - proteasome component ECM29 (ECM29) Genomic Order:  2071
Name:  ? Phvul.008G203200 Secondary Identifier:  ? PAC:37158854
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G203200 0.5kb upstream 0.5kb upstream 31981 true Chr08: 54998055-55030035 Phaseolus vulgaris
Phvul.008G203200 0.5kb upstream 0.5kb upstream 500 false Chr08: 55029536-55030035 Phaseolus vulgaris
Phvul.008G203200 0.5kb downstream 0.5kb downstream 31981 true Chr08: 54997555-55029535 Phaseolus vulgaris
Phvul.008G203200 0.5kb downstream 0.5kb downstream 500 false Chr08: 54997555-54998054 Phaseolus vulgaris
Phvul.008G203200 1.0kb upstream 1.0kb upstream 32481 true Chr08: 54998055-55030535 Phaseolus vulgaris
Phvul.008G203200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 55029536-55030535 Phaseolus vulgaris
Phvul.008G203200 1.0kb downstream 1.0kb downstream 32481 true Chr08: 54997055-55029535 Phaseolus vulgaris
Phvul.008G203200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 54997055-54998054 Phaseolus vulgaris
Phvul.008G203200 2.0kb upstream 2.0kb upstream 33481 true Chr08: 54998055-55031535 Phaseolus vulgaris
Phvul.008G203200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 55029536-55031535 Phaseolus vulgaris
Phvul.008G203200 2.0kb downstream 2.0kb downstream 33481 true Chr08: 54996055-55029535 Phaseolus vulgaris
Phvul.008G203200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 54996055-54998054 Phaseolus vulgaris
Phvul.008G203200 5.0kb upstream 5.0kb upstream 36481 true Chr08: 54998055-55034535 Phaseolus vulgaris
Phvul.008G203200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 55029536-55034535 Phaseolus vulgaris
Phvul.008G203200 5.0kb downstream 5.0kb downstream 36481 true Chr08: 54993055-55029535 Phaseolus vulgaris
Phvul.008G203200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 54993055-54998054 Phaseolus vulgaris
Phvul.008G203200 10.0kb upstream 10.0kb upstream 41481 true Chr08: 54998055-55039535 Phaseolus vulgaris
Phvul.008G203200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 55029536-55039535 Phaseolus vulgaris
Phvul.008G203200 10.0kb downstream 10.0kb downstream 41481 true Chr08: 54988055-55029535 Phaseolus vulgaris
Phvul.008G203200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 54988055-54998054 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299645 5265 Fabidae View MSA
124060426 5270 Rosid View MSA
123740160 5271 Pentapetalae View MSA
122788135 5272 Eudicot View MSA
122042594 5273 Angiosperm View MSA
121344548 5274 Embryophyte View MSA
123425052 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.30751 0.0 6.39495   Low
cufflinks 3.72564 0.0 9.93707    
cufflinks 5.9916 0.0 15.5528    
cufflinks 2.55918 0.0 7.0978   Low
cufflinks 4.33359 0.0 11.4954    
cufflinks 6.94275 0.0 17.9778    
cufflinks 7.77025 0.0 20.0979    
cufflinks 7.96687 0.0 20.5935    
cufflinks 10.0372 0.0 25.9574   High
cufflinks 7.0085 0.0 18.1462    
cufflinks 3.1706 0.0 8.6108    

0 Strain