Gene : Phvul.L001667 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12801:SF56 - EXONUCLEASE FAMILY PROTEIN Genomic Order:  1
Name:  ? Phvul.L001667 Secondary Identifier:  ? PAC:37148527
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L001667 0.5kb upstream 0.5kb upstream 2565 true scaffold_40: 98439-101003 Phaseolus vulgaris
Phvul.L001667 0.5kb upstream 0.5kb upstream 500 false scaffold_40: 100504-101003 Phaseolus vulgaris
Phvul.L001667 0.5kb downstream 0.5kb downstream 2565 true scaffold_40: 97939-100503 Phaseolus vulgaris
Phvul.L001667 0.5kb downstream 0.5kb downstream 500 false scaffold_40: 97939-98438 Phaseolus vulgaris
Phvul.L001667 1.0kb upstream 1.0kb upstream 3065 true scaffold_40: 98439-101503 Phaseolus vulgaris
Phvul.L001667 1.0kb upstream 1.0kb upstream 1000 false scaffold_40: 100504-101503 Phaseolus vulgaris
Phvul.L001667 1.0kb downstream 1.0kb downstream 3065 true scaffold_40: 97439-100503 Phaseolus vulgaris
Phvul.L001667 1.0kb downstream 1.0kb downstream 1000 false scaffold_40: 97439-98438 Phaseolus vulgaris
Phvul.L001667 2.0kb upstream 2.0kb upstream 4065 true scaffold_40: 98439-102503 Phaseolus vulgaris
Phvul.L001667 2.0kb upstream 2.0kb upstream 2000 false scaffold_40: 100504-102503 Phaseolus vulgaris
Phvul.L001667 2.0kb downstream 2.0kb downstream 4065 true scaffold_40: 96439-100503 Phaseolus vulgaris
Phvul.L001667 2.0kb downstream 2.0kb downstream 2000 false scaffold_40: 96439-98438 Phaseolus vulgaris
Phvul.L001667 5.0kb upstream 5.0kb upstream 7065 true scaffold_40: 98439-105503 Phaseolus vulgaris
Phvul.L001667 5.0kb upstream 5.0kb upstream 5000 false scaffold_40: 100504-105503 Phaseolus vulgaris
Phvul.L001667 5.0kb downstream 5.0kb downstream 7065 true scaffold_40: 93439-100503 Phaseolus vulgaris
Phvul.L001667 5.0kb downstream 5.0kb downstream 5000 false scaffold_40: 93439-98438 Phaseolus vulgaris
Phvul.L001667 10.0kb upstream 10.0kb upstream 12065 true scaffold_40: 98439-110503 Phaseolus vulgaris
Phvul.L001667 10.0kb upstream 10.0kb upstream 10000 false scaffold_40: 100504-110503 Phaseolus vulgaris
Phvul.L001667 10.0kb downstream 10.0kb downstream 12065 true scaffold_40: 88439-100503 Phaseolus vulgaris
Phvul.L001667 10.0kb downstream 10.0kb downstream 10000 false scaffold_40: 88439-98438 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302997 5265 Fabidae View MSA
124063595 5270 Rosid View MSA
123750335 5271 Pentapetalae View MSA
122794102 5272 Eudicot View MSA
122048562 5273 Angiosperm View MSA
121349670 5274 Embryophyte View MSA
123428502 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0339751 0.0 0.168381 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.16504 0.0 0.692951 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain