Gene : Phvul.008G285400 P. vulgaris v2.1
Defline:  (1 of 3) K09487 - heat shock protein 90kDa beta (HSP90B, TRA1) Genomic Order:  2872
Name:  ? Phvul.008G285400 Secondary Identifier:  ? PAC:37159047
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G285400 0.5kb upstream 0.5kb upstream 5664 true Chr08: 62524217-62529880 Phaseolus vulgaris
Phvul.008G285400 0.5kb upstream 0.5kb upstream 500 false Chr08: 62524217-62524716 Phaseolus vulgaris
Phvul.008G285400 0.5kb downstream 0.5kb downstream 5664 true Chr08: 62524717-62530380 Phaseolus vulgaris
Phvul.008G285400 0.5kb downstream 0.5kb downstream 500 false Chr08: 62529881-62530380 Phaseolus vulgaris
Phvul.008G285400 1.0kb upstream 1.0kb upstream 6164 true Chr08: 62523717-62529880 Phaseolus vulgaris
Phvul.008G285400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 62523717-62524716 Phaseolus vulgaris
Phvul.008G285400 1.0kb downstream 1.0kb downstream 6164 true Chr08: 62524717-62530880 Phaseolus vulgaris
Phvul.008G285400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 62529881-62530880 Phaseolus vulgaris
Phvul.008G285400 2.0kb upstream 2.0kb upstream 7164 true Chr08: 62522717-62529880 Phaseolus vulgaris
Phvul.008G285400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 62522717-62524716 Phaseolus vulgaris
Phvul.008G285400 2.0kb downstream 2.0kb downstream 7164 true Chr08: 62524717-62531880 Phaseolus vulgaris
Phvul.008G285400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 62529881-62531880 Phaseolus vulgaris
Phvul.008G285400 5.0kb upstream 5.0kb upstream 10164 true Chr08: 62519717-62529880 Phaseolus vulgaris
Phvul.008G285400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 62519717-62524716 Phaseolus vulgaris
Phvul.008G285400 5.0kb downstream 5.0kb downstream 10164 true Chr08: 62524717-62534880 Phaseolus vulgaris
Phvul.008G285400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 62529881-62534880 Phaseolus vulgaris
Phvul.008G285400 10.0kb upstream 10.0kb upstream 15164 true Chr08: 62514717-62529880 Phaseolus vulgaris
Phvul.008G285400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 62514717-62524716 Phaseolus vulgaris
Phvul.008G285400 10.0kb downstream 10.0kb downstream 15164 true Chr08: 62524717-62539880 Phaseolus vulgaris
Phvul.008G285400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 62529881-62539880 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301579 5265 Fabidae View MSA
124063004 5270 Rosid View MSA
123737244 5271 Pentapetalae View MSA
122790362 5272 Eudicot View MSA
122044795 5273 Angiosperm View MSA
121310342 5274 Embryophyte View MSA
123428204 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.0666 0.0 41.5473    
cufflinks 32.7842 0.0 87.307 High High
cufflinks 6.855 0.0 18.1718   Low
cufflinks 14.456 0.0 37.3893    
cufflinks 14.5636 0.0 37.6573    
cufflinks 7.28919 0.0 19.2668   Low
cufflinks 19.5682 0.0 50.7684    
cufflinks 26.1991 0.0 68.896    
cufflinks 23.7454 0.0 61.9898    
cufflinks 20.1419 0.0 52.2624    
cufflinks 13.9057 0.0 35.9654    

0 Strain