Gene : Phvul.008G280600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR12758:SF13 - GBF-INTERACTING PROTEIN 1 Genomic Order:  2825
Name:  ? Phvul.008G280600 Secondary Identifier:  ? PAC:37158185
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G280600 0.5kb upstream 0.5kb upstream 7926 true Chr08: 62181309-62189234 Phaseolus vulgaris
Phvul.008G280600 0.5kb upstream 0.5kb upstream 500 false Chr08: 62181309-62181808 Phaseolus vulgaris
Phvul.008G280600 0.5kb downstream 0.5kb downstream 7926 true Chr08: 62181809-62189734 Phaseolus vulgaris
Phvul.008G280600 0.5kb downstream 0.5kb downstream 500 false Chr08: 62189235-62189734 Phaseolus vulgaris
Phvul.008G280600 1.0kb upstream 1.0kb upstream 8426 true Chr08: 62180809-62189234 Phaseolus vulgaris
Phvul.008G280600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 62180809-62181808 Phaseolus vulgaris
Phvul.008G280600 1.0kb downstream 1.0kb downstream 8426 true Chr08: 62181809-62190234 Phaseolus vulgaris
Phvul.008G280600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 62189235-62190234 Phaseolus vulgaris
Phvul.008G280600 2.0kb upstream 2.0kb upstream 9426 true Chr08: 62179809-62189234 Phaseolus vulgaris
Phvul.008G280600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 62179809-62181808 Phaseolus vulgaris
Phvul.008G280600 2.0kb downstream 2.0kb downstream 9426 true Chr08: 62181809-62191234 Phaseolus vulgaris
Phvul.008G280600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 62189235-62191234 Phaseolus vulgaris
Phvul.008G280600 5.0kb upstream 5.0kb upstream 12426 true Chr08: 62176809-62189234 Phaseolus vulgaris
Phvul.008G280600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 62176809-62181808 Phaseolus vulgaris
Phvul.008G280600 5.0kb downstream 5.0kb downstream 12426 true Chr08: 62181809-62194234 Phaseolus vulgaris
Phvul.008G280600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 62189235-62194234 Phaseolus vulgaris
Phvul.008G280600 10.0kb upstream 10.0kb upstream 17426 true Chr08: 62171809-62189234 Phaseolus vulgaris
Phvul.008G280600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 62171809-62181808 Phaseolus vulgaris
Phvul.008G280600 10.0kb downstream 10.0kb downstream 17426 true Chr08: 62181809-62199234 Phaseolus vulgaris
Phvul.008G280600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 62189235-62199234 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779855 5273 Angiosperm View MSA
122302951 5265 Fabidae View MSA
124069952 5270 Rosid View MSA
123744353 5271 Pentapetalae View MSA
122771039 5272 Eudicot View MSA
121051492 5274 Embryophyte View MSA
123091579 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.98238 0.0 23.5152   Low
cufflinks 22.5811 0.0 58.79    
cufflinks 18.7159 0.0 48.4744    
cufflinks 13.2347 0.0 34.2449   Low
cufflinks 22.1885 0.0 57.6514    
cufflinks 14.2547 0.0 36.8517    
cufflinks 19.74 0.0 51.2256    
cufflinks 21.8197 0.0 56.8145    
cufflinks 23.1295 0.0 60.3464    
cufflinks 30.7115 0.0 81.1782   High
cufflinks 19.3753 0.0 50.1829    

0 Strain