Gene : Phvul.L003081 P. vulgaris v2.1
Defline:  (1 of 2) PTHR27003:SF94 - RECEPTOR-LIKE PROTEIN KINASE HERK 1 Genomic Order:  20
Name:  ? Phvul.L003081 Secondary Identifier:  ? PAC:37148505
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L003081 0.5kb upstream 0.5kb upstream 4128 true scaffold_30: 229843-233970 Phaseolus vulgaris
Phvul.L003081 0.5kb upstream 0.5kb upstream 500 false scaffold_30: 233471-233970 Phaseolus vulgaris
Phvul.L003081 0.5kb downstream 0.5kb downstream 4128 true scaffold_30: 229343-233470 Phaseolus vulgaris
Phvul.L003081 0.5kb downstream 0.5kb downstream 500 false scaffold_30: 229343-229842 Phaseolus vulgaris
Phvul.L003081 1.0kb upstream 1.0kb upstream 4628 true scaffold_30: 229843-234470 Phaseolus vulgaris
Phvul.L003081 1.0kb upstream 1.0kb upstream 1000 false scaffold_30: 233471-234470 Phaseolus vulgaris
Phvul.L003081 1.0kb downstream 1.0kb downstream 4628 true scaffold_30: 228843-233470 Phaseolus vulgaris
Phvul.L003081 1.0kb downstream 1.0kb downstream 1000 false scaffold_30: 228843-229842 Phaseolus vulgaris
Phvul.L003081 2.0kb upstream 2.0kb upstream 5628 true scaffold_30: 229843-235470 Phaseolus vulgaris
Phvul.L003081 2.0kb upstream 2.0kb upstream 2000 false scaffold_30: 233471-235470 Phaseolus vulgaris
Phvul.L003081 2.0kb downstream 2.0kb downstream 5628 true scaffold_30: 227843-233470 Phaseolus vulgaris
Phvul.L003081 2.0kb downstream 2.0kb downstream 2000 false scaffold_30: 227843-229842 Phaseolus vulgaris
Phvul.L003081 5.0kb upstream 5.0kb upstream 8628 true scaffold_30: 229843-238470 Phaseolus vulgaris
Phvul.L003081 5.0kb upstream 5.0kb upstream 5000 false scaffold_30: 233471-238470 Phaseolus vulgaris
Phvul.L003081 5.0kb downstream 5.0kb downstream 8628 true scaffold_30: 224843-233470 Phaseolus vulgaris
Phvul.L003081 5.0kb downstream 5.0kb downstream 5000 false scaffold_30: 224843-229842 Phaseolus vulgaris
Phvul.L003081 10.0kb upstream 10.0kb upstream 13628 true scaffold_30: 229843-243470 Phaseolus vulgaris
Phvul.L003081 10.0kb upstream 10.0kb upstream 10000 false scaffold_30: 233471-243470 Phaseolus vulgaris
Phvul.L003081 10.0kb downstream 10.0kb downstream 13628 true scaffold_30: 219843-233470 Phaseolus vulgaris
Phvul.L003081 10.0kb downstream 10.0kb downstream 10000 false scaffold_30: 219843-229842 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310604 5265 Fabidae View MSA
124074134 5270 Rosid View MSA
123748316 5271 Pentapetalae View MSA
122789518 5272 Eudicot View MSA
122044350 5273 Angiosperm View MSA
121310282 5274 Embryophyte View MSA
123347811 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.32983 0.0 19.3063   Low
cufflinks 11.5144 0.0 29.8114    
cufflinks 14.7087 0.0 38.0356    
cufflinks 13.6923 0.0 35.4088    
cufflinks 14.8142 0.0 38.2921    
cufflinks 13.0429 0.0 33.7198    
cufflinks 13.5049 0.0 34.9115    
cufflinks 9.74966 0.0 25.3167   Low
cufflinks 21.43 0.0 55.7565   High
cufflinks 24.6481 0.0 64.6536   High
cufflinks 13.7805 0.0 35.626    

0 Strain