Gene : Phvul.011G017100 P. vulgaris v2.1
Defline:  (1 of 2) K05928 - tocopherol O-methyltransferase (E2.1.1.95) Genomic Order:  173
Name:  ? Phvul.011G017100 Secondary Identifier:  ? PAC:37154990
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-1422 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7436 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G017100 0.5kb upstream 0.5kb upstream 4694 true Chr11: 1339158-1343851 Phaseolus vulgaris
Phvul.011G017100 0.5kb upstream 0.5kb upstream 500 false Chr11: 1343352-1343851 Phaseolus vulgaris
Phvul.011G017100 0.5kb downstream 0.5kb downstream 4694 true Chr11: 1338658-1343351 Phaseolus vulgaris
Phvul.011G017100 0.5kb downstream 0.5kb downstream 500 false Chr11: 1338658-1339157 Phaseolus vulgaris
Phvul.011G017100 1.0kb upstream 1.0kb upstream 5194 true Chr11: 1339158-1344351 Phaseolus vulgaris
Phvul.011G017100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1343352-1344351 Phaseolus vulgaris
Phvul.011G017100 1.0kb downstream 1.0kb downstream 5194 true Chr11: 1338158-1343351 Phaseolus vulgaris
Phvul.011G017100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1338158-1339157 Phaseolus vulgaris
Phvul.011G017100 2.0kb upstream 2.0kb upstream 6194 true Chr11: 1339158-1345351 Phaseolus vulgaris
Phvul.011G017100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1343352-1345351 Phaseolus vulgaris
Phvul.011G017100 2.0kb downstream 2.0kb downstream 6194 true Chr11: 1337158-1343351 Phaseolus vulgaris
Phvul.011G017100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1337158-1339157 Phaseolus vulgaris
Phvul.011G017100 5.0kb upstream 5.0kb upstream 9194 true Chr11: 1339158-1348351 Phaseolus vulgaris
Phvul.011G017100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1343352-1348351 Phaseolus vulgaris
Phvul.011G017100 5.0kb downstream 5.0kb downstream 9194 true Chr11: 1334158-1343351 Phaseolus vulgaris
Phvul.011G017100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1334158-1339157 Phaseolus vulgaris
Phvul.011G017100 10.0kb upstream 10.0kb upstream 14194 true Chr11: 1339158-1353351 Phaseolus vulgaris
Phvul.011G017100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1343352-1353351 Phaseolus vulgaris
Phvul.011G017100 10.0kb downstream 10.0kb downstream 14194 true Chr11: 1329158-1343351 Phaseolus vulgaris
Phvul.011G017100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1329158-1339157 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299089 5265 Fabidae View MSA
124067151 5270 Rosid View MSA
123747323 5271 Pentapetalae View MSA
122786433 5272 Eudicot View MSA
122044817 5273 Angiosperm View MSA
121347406 5274 Embryophyte View MSA
123427925 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.64728 0.0 16.8236    
cufflinks 3.92427 0.0 12.1567   Low
cufflinks 21.5416 0.0 56.8231   High
cufflinks 10.6279 0.0 29.6612    
cufflinks 25.1171 0.0 65.687   High
cufflinks 5.78536 0.0 17.1587    
cufflinks 10.3079 0.0 28.6821    
cufflinks 5.03365 0.0 15.1091   Low
cufflinks 19.3465 0.0 51.2056    
cufflinks 18.8342 0.0 50.0751    
cufflinks 14.2244 0.0 38.626    

0 Strain