Gene : Phvul.011G020500 P. vulgaris v2.1
Defline:  (1 of 2) K04683 - transcription factor Dp-1 (TFDP1) Genomic Order:  207
Name:  ? Phvul.011G020500 Secondary Identifier:  ? PAC:37155741
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G020500 0.5kb upstream 0.5kb upstream 3752 true Chr11: 1591876-1595627 Phaseolus vulgaris
Phvul.011G020500 0.5kb upstream 0.5kb upstream 500 false Chr11: 1595128-1595627 Phaseolus vulgaris
Phvul.011G020500 0.5kb downstream 0.5kb downstream 3752 true Chr11: 1591376-1595127 Phaseolus vulgaris
Phvul.011G020500 0.5kb downstream 0.5kb downstream 500 false Chr11: 1591376-1591875 Phaseolus vulgaris
Phvul.011G020500 1.0kb upstream 1.0kb upstream 4252 true Chr11: 1591876-1596127 Phaseolus vulgaris
Phvul.011G020500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1595128-1596127 Phaseolus vulgaris
Phvul.011G020500 1.0kb downstream 1.0kb downstream 4252 true Chr11: 1590876-1595127 Phaseolus vulgaris
Phvul.011G020500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1590876-1591875 Phaseolus vulgaris
Phvul.011G020500 2.0kb upstream 2.0kb upstream 5252 true Chr11: 1591876-1597127 Phaseolus vulgaris
Phvul.011G020500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1595128-1597127 Phaseolus vulgaris
Phvul.011G020500 2.0kb downstream 2.0kb downstream 5252 true Chr11: 1589876-1595127 Phaseolus vulgaris
Phvul.011G020500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1589876-1591875 Phaseolus vulgaris
Phvul.011G020500 5.0kb upstream 5.0kb upstream 8252 true Chr11: 1591876-1600127 Phaseolus vulgaris
Phvul.011G020500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1595128-1600127 Phaseolus vulgaris
Phvul.011G020500 5.0kb downstream 5.0kb downstream 8252 true Chr11: 1586876-1595127 Phaseolus vulgaris
Phvul.011G020500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1586876-1591875 Phaseolus vulgaris
Phvul.011G020500 10.0kb upstream 10.0kb upstream 13252 true Chr11: 1591876-1605127 Phaseolus vulgaris
Phvul.011G020500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1595128-1605127 Phaseolus vulgaris
Phvul.011G020500 10.0kb downstream 10.0kb downstream 13252 true Chr11: 1581876-1595127 Phaseolus vulgaris
Phvul.011G020500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1581876-1591875 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255176 5265 Fabidae View MSA
123997008 5270 Rosid View MSA
123571374 5271 Pentapetalae View MSA
122606100 5272 Eudicot View MSA
122050879 5273 Angiosperm View MSA
121349411 5274 Embryophyte View MSA
123427533 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.6188 0.0 81.6428   High
cufflinks 10.4962 0.0 38.6491    
cufflinks 11.6784 0.0 43.1121    
cufflinks 6.21886 0.0 25.7893   Low
cufflinks 10.1986 0.0 38.0648    
cufflinks 8.31339 0.0 32.2492    
cufflinks 8.19484 0.0 31.3723    
cufflinks 7.97582 0.0 30.6384    
cufflinks 5.32206 0.0 22.3164   Low
cufflinks 17.6053 0.0 65.2526   High
cufflinks 13.2319 0.0 46.5258    

0 Strain