Gene : Phvul.011G010400 P. vulgaris v2.1
Defline:  (1 of 1) K14005 - protein transport protein SEC31 (SEC31) Genomic Order:  105
Name:  ? Phvul.011G010400 Secondary Identifier:  ? PAC:37156373
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G010400 0.5kb upstream 0.5kb upstream 11436 true Chr11: 780704-792139 Phaseolus vulgaris
Phvul.011G010400 0.5kb upstream 0.5kb upstream 500 false Chr11: 791640-792139 Phaseolus vulgaris
Phvul.011G010400 0.5kb downstream 0.5kb downstream 11436 true Chr11: 780204-791639 Phaseolus vulgaris
Phvul.011G010400 0.5kb downstream 0.5kb downstream 500 false Chr11: 780204-780703 Phaseolus vulgaris
Phvul.011G010400 1.0kb upstream 1.0kb upstream 11936 true Chr11: 780704-792639 Phaseolus vulgaris
Phvul.011G010400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 791640-792639 Phaseolus vulgaris
Phvul.011G010400 1.0kb downstream 1.0kb downstream 11936 true Chr11: 779704-791639 Phaseolus vulgaris
Phvul.011G010400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 779704-780703 Phaseolus vulgaris
Phvul.011G010400 2.0kb upstream 2.0kb upstream 12936 true Chr11: 780704-793639 Phaseolus vulgaris
Phvul.011G010400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 791640-793639 Phaseolus vulgaris
Phvul.011G010400 2.0kb downstream 2.0kb downstream 12936 true Chr11: 778704-791639 Phaseolus vulgaris
Phvul.011G010400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 778704-780703 Phaseolus vulgaris
Phvul.011G010400 5.0kb upstream 5.0kb upstream 15936 true Chr11: 780704-796639 Phaseolus vulgaris
Phvul.011G010400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 791640-796639 Phaseolus vulgaris
Phvul.011G010400 5.0kb downstream 5.0kb downstream 15936 true Chr11: 775704-791639 Phaseolus vulgaris
Phvul.011G010400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 775704-780703 Phaseolus vulgaris
Phvul.011G010400 10.0kb upstream 10.0kb upstream 20936 true Chr11: 780704-801639 Phaseolus vulgaris
Phvul.011G010400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 791640-801639 Phaseolus vulgaris
Phvul.011G010400 10.0kb downstream 10.0kb downstream 20936 true Chr11: 770704-791639 Phaseolus vulgaris
Phvul.011G010400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 770704-780703 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029056 5273 Angiosperm View MSA
122300470 5265 Fabidae View MSA
124062356 5270 Rosid View MSA
123747361 5271 Pentapetalae View MSA
122791876 5272 Eudicot View MSA
121344337 5274 Embryophyte View MSA
123426068 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.4544 0.0 40.3267   Low
cufflinks 44.3333 0.0 126.492 High  
cufflinks 50.0861 0.0 145.52 High  
cufflinks 31.3769 0.0 85.7874    
cufflinks 50.154 0.0 144.587 High  
cufflinks 49.3983 0.0 142.997 High  
cufflinks 55.8691 0.0 164.549 High  
cufflinks 50.8453 0.0 148.458 High  
cufflinks 68.894 0.0 208.637 High High
cufflinks 61.0109 0.0 181.469 High  
cufflinks 49.7008 0.0 143.184 High  

0 Strain