Gene : Phvul.011G003900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31989:SF18 - PROTEIN BEARSKIN1 Genomic Order:  39
Name:  ? Phvul.011G003900 Secondary Identifier:  ? PAC:37156389
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G003900 0.5kb upstream 0.5kb upstream 2722 true Chr11: 283185-285906 Phaseolus vulgaris
Phvul.011G003900 0.5kb upstream 0.5kb upstream 500 false Chr11: 285407-285906 Phaseolus vulgaris
Phvul.011G003900 0.5kb downstream 0.5kb downstream 2722 true Chr11: 282685-285406 Phaseolus vulgaris
Phvul.011G003900 0.5kb downstream 0.5kb downstream 500 false Chr11: 282685-283184 Phaseolus vulgaris
Phvul.011G003900 1.0kb upstream 1.0kb upstream 3222 true Chr11: 283185-286406 Phaseolus vulgaris
Phvul.011G003900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 285407-286406 Phaseolus vulgaris
Phvul.011G003900 1.0kb downstream 1.0kb downstream 3222 true Chr11: 282185-285406 Phaseolus vulgaris
Phvul.011G003900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 282185-283184 Phaseolus vulgaris
Phvul.011G003900 2.0kb upstream 2.0kb upstream 4222 true Chr11: 283185-287406 Phaseolus vulgaris
Phvul.011G003900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 285407-287406 Phaseolus vulgaris
Phvul.011G003900 2.0kb downstream 2.0kb downstream 4222 true Chr11: 281185-285406 Phaseolus vulgaris
Phvul.011G003900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 281185-283184 Phaseolus vulgaris
Phvul.011G003900 5.0kb upstream 5.0kb upstream 7222 true Chr11: 283185-290406 Phaseolus vulgaris
Phvul.011G003900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 285407-290406 Phaseolus vulgaris
Phvul.011G003900 5.0kb downstream 5.0kb downstream 7222 true Chr11: 278185-285406 Phaseolus vulgaris
Phvul.011G003900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 278185-283184 Phaseolus vulgaris
Phvul.011G003900 10.0kb upstream 10.0kb upstream 12222 true Chr11: 283185-295406 Phaseolus vulgaris
Phvul.011G003900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 285407-295406 Phaseolus vulgaris
Phvul.011G003900 10.0kb downstream 10.0kb downstream 12222 true Chr11: 273185-285406 Phaseolus vulgaris
Phvul.011G003900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 273185-283184 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304436 5265 Fabidae View MSA
124062981 5270 Rosid View MSA
123744890 5271 Pentapetalae View MSA
122787580 5272 Eudicot View MSA
122046841 5273 Angiosperm View MSA
121351431 5274 Embryophyte View MSA
123382163 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.028106 0.0 0.139293 Low  
cufflinks 0.0259982 0.0 0.129851 Low  
cufflinks 0.0484203 0.0 0.226157 Low  
cufflinks 0.0529706 0.0 0.246056 Low  
cufflinks 0.0969776 0.0 0.424749 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.10495 0.0 3.90589   High
cufflinks 0.0881164 0.0 0.385833 Low  
cufflinks 4.8854 0.0 14.6035   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0280612 0.0 0.139213 Low  

0 Strain