Gene : Phvul.L010943 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31669:SF42 - PROTEIN FAR1-RELATED SEQUENCE 4 Genomic Order:  94
Name:  ? Phvul.L010943 Secondary Identifier:  ? PAC:37178937
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L010943 0.5kb upstream 0.5kb upstream 5007 true scaffold_15: 755307-760313 Phaseolus vulgaris
Phvul.L010943 0.5kb upstream 0.5kb upstream 500 false scaffold_15: 759814-760313 Phaseolus vulgaris
Phvul.L010943 0.5kb downstream 0.5kb downstream 5007 true scaffold_15: 754807-759813 Phaseolus vulgaris
Phvul.L010943 0.5kb downstream 0.5kb downstream 500 false scaffold_15: 754807-755306 Phaseolus vulgaris
Phvul.L010943 1.0kb upstream 1.0kb upstream 5507 true scaffold_15: 755307-760813 Phaseolus vulgaris
Phvul.L010943 1.0kb upstream 1.0kb upstream 1000 false scaffold_15: 759814-760813 Phaseolus vulgaris
Phvul.L010943 1.0kb downstream 1.0kb downstream 5507 true scaffold_15: 754307-759813 Phaseolus vulgaris
Phvul.L010943 1.0kb downstream 1.0kb downstream 1000 false scaffold_15: 754307-755306 Phaseolus vulgaris
Phvul.L010943 2.0kb upstream 2.0kb upstream 6507 true scaffold_15: 755307-761813 Phaseolus vulgaris
Phvul.L010943 2.0kb upstream 2.0kb upstream 2000 false scaffold_15: 759814-761813 Phaseolus vulgaris
Phvul.L010943 2.0kb downstream 2.0kb downstream 6507 true scaffold_15: 753307-759813 Phaseolus vulgaris
Phvul.L010943 2.0kb downstream 2.0kb downstream 2000 false scaffold_15: 753307-755306 Phaseolus vulgaris
Phvul.L010943 5.0kb upstream 5.0kb upstream 9507 true scaffold_15: 755307-764813 Phaseolus vulgaris
Phvul.L010943 5.0kb upstream 5.0kb upstream 5000 false scaffold_15: 759814-764813 Phaseolus vulgaris
Phvul.L010943 5.0kb downstream 5.0kb downstream 9507 true scaffold_15: 750307-759813 Phaseolus vulgaris
Phvul.L010943 5.0kb downstream 5.0kb downstream 5000 false scaffold_15: 750307-755306 Phaseolus vulgaris
Phvul.L010943 10.0kb upstream 10.0kb upstream 14507 true scaffold_15: 755307-769813 Phaseolus vulgaris
Phvul.L010943 10.0kb upstream 10.0kb upstream 10000 false scaffold_15: 759814-769813 Phaseolus vulgaris
Phvul.L010943 10.0kb downstream 10.0kb downstream 14507 true scaffold_15: 745307-759813 Phaseolus vulgaris
Phvul.L010943 10.0kb downstream 10.0kb downstream 10000 false scaffold_15: 745307-755306 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303805 5265 Fabidae View MSA
124065498 5270 Rosid View MSA
123752178 5271 Pentapetalae View MSA
122796628 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.95043 0.0 13.7067    
cufflinks 5.5604 0.0 15.2489    
cufflinks 4.63314 0.0 12.8888    
cufflinks 3.70327 0.0 10.6517   Low
cufflinks 4.32221 0.0 12.2121    
cufflinks 4.52349 0.0 12.6317    
cufflinks 4.43322 0.0 12.427    
cufflinks 4.3648 0.0 12.1742    
cufflinks 4.63923 0.0 12.9879    
cufflinks 7.43042 0.0 19.8943   High
cufflinks 4.57804 0.0 12.851    

0 Strain