Gene : Phvul.011G077301 P. vulgaris v2.1
Defline:  (1 of 4) K14820 - ribosome biogenesis protein BRX1 (BRX1, BRIX1) Genomic Order:  249
Name:  ? Phvul.011G077301 Secondary Identifier:  ? PAC:37156274
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G077301 0.5kb upstream 0.5kb upstream 5292 true Chr11: 2022614-2027905 Phaseolus vulgaris
Phvul.011G077301 0.5kb upstream 0.5kb upstream 500 false Chr11: 2022614-2023113 Phaseolus vulgaris
Phvul.011G077301 0.5kb downstream 0.5kb downstream 5292 true Chr11: 2023114-2028405 Phaseolus vulgaris
Phvul.011G077301 0.5kb downstream 0.5kb downstream 500 false Chr11: 2027906-2028405 Phaseolus vulgaris
Phvul.011G077301 1.0kb upstream 1.0kb upstream 5792 true Chr11: 2022114-2027905 Phaseolus vulgaris
Phvul.011G077301 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2022114-2023113 Phaseolus vulgaris
Phvul.011G077301 1.0kb downstream 1.0kb downstream 5792 true Chr11: 2023114-2028905 Phaseolus vulgaris
Phvul.011G077301 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2027906-2028905 Phaseolus vulgaris
Phvul.011G077301 2.0kb upstream 2.0kb upstream 6792 true Chr11: 2021114-2027905 Phaseolus vulgaris
Phvul.011G077301 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2021114-2023113 Phaseolus vulgaris
Phvul.011G077301 2.0kb downstream 2.0kb downstream 6792 true Chr11: 2023114-2029905 Phaseolus vulgaris
Phvul.011G077301 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2027906-2029905 Phaseolus vulgaris
Phvul.011G077301 5.0kb upstream 5.0kb upstream 9792 true Chr11: 2018114-2027905 Phaseolus vulgaris
Phvul.011G077301 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2018114-2023113 Phaseolus vulgaris
Phvul.011G077301 5.0kb downstream 5.0kb downstream 9792 true Chr11: 2023114-2032905 Phaseolus vulgaris
Phvul.011G077301 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2027906-2032905 Phaseolus vulgaris
Phvul.011G077301 10.0kb upstream 10.0kb upstream 14792 true Chr11: 2013114-2027905 Phaseolus vulgaris
Phvul.011G077301 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2013114-2023113 Phaseolus vulgaris
Phvul.011G077301 10.0kb downstream 10.0kb downstream 14792 true Chr11: 2023114-2037905 Phaseolus vulgaris
Phvul.011G077301 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2027906-2037905 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301161 5265 Fabidae View MSA
124066566 5270 Rosid View MSA
123743226 5271 Pentapetalae View MSA
122791953 5272 Eudicot View MSA
122044943 5273 Angiosperm View MSA
121349152 5274 Embryophyte View MSA
123424371 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.06493 0.0 17.5929    
cufflinks 6.65071 0.0 19.1366    
cufflinks 2.89764 0.0 9.12046   Low
cufflinks 4.74743 0.0 14.3323    
cufflinks 5.38813 0.0 16.0147    
cufflinks 3.0825 0.0 9.65643   Low
cufflinks 7.05508 0.0 20.1383    
cufflinks 7.30278 0.0 20.6633    
cufflinks 7.98827 0.0 22.5976   High
cufflinks 2.69768 0.0 8.61423   Low
cufflinks 4.84589 0.0 14.5253    

0 Strain