Gene : Phvul.011G077900 P. vulgaris v2.1
Defline:  (1 of 65) 3.2.1.39 - Glucan endo-1,3-beta-D-glucosidase / Laminarinase Genomic Order:  252
Name:  ? Phvul.011G077900 Secondary Identifier:  ? PAC:37154742
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G077900 0.5kb upstream 0.5kb upstream 2430 true Chr11: 2070444-2072873 Phaseolus vulgaris
Phvul.011G077900 0.5kb upstream 0.5kb upstream 500 false Chr11: 2072374-2072873 Phaseolus vulgaris
Phvul.011G077900 0.5kb downstream 0.5kb downstream 2430 true Chr11: 2069944-2072373 Phaseolus vulgaris
Phvul.011G077900 0.5kb downstream 0.5kb downstream 500 false Chr11: 2069944-2070443 Phaseolus vulgaris
Phvul.011G077900 1.0kb upstream 1.0kb upstream 2930 true Chr11: 2070444-2073373 Phaseolus vulgaris
Phvul.011G077900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2072374-2073373 Phaseolus vulgaris
Phvul.011G077900 1.0kb downstream 1.0kb downstream 2930 true Chr11: 2069444-2072373 Phaseolus vulgaris
Phvul.011G077900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2069444-2070443 Phaseolus vulgaris
Phvul.011G077900 2.0kb upstream 2.0kb upstream 3930 true Chr11: 2070444-2074373 Phaseolus vulgaris
Phvul.011G077900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2072374-2074373 Phaseolus vulgaris
Phvul.011G077900 2.0kb downstream 2.0kb downstream 3930 true Chr11: 2068444-2072373 Phaseolus vulgaris
Phvul.011G077900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2068444-2070443 Phaseolus vulgaris
Phvul.011G077900 5.0kb upstream 5.0kb upstream 6930 true Chr11: 2070444-2077373 Phaseolus vulgaris
Phvul.011G077900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2072374-2077373 Phaseolus vulgaris
Phvul.011G077900 5.0kb downstream 5.0kb downstream 6930 true Chr11: 2065444-2072373 Phaseolus vulgaris
Phvul.011G077900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2065444-2070443 Phaseolus vulgaris
Phvul.011G077900 10.0kb upstream 10.0kb upstream 11930 true Chr11: 2070444-2082373 Phaseolus vulgaris
Phvul.011G077900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2072374-2082373 Phaseolus vulgaris
Phvul.011G077900 10.0kb downstream 10.0kb downstream 11930 true Chr11: 2060444-2072373 Phaseolus vulgaris
Phvul.011G077900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2060444-2070443 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310885 5265 Fabidae View MSA
124073556 5270 Rosid View MSA
123753144 5271 Pentapetalae View MSA
122796626 5272 Eudicot View MSA
122051222 5273 Angiosperm View MSA
121351779 5274 Embryophyte View MSA
123382322 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 154.509 0.0 437.232 High High
cufflinks 45.5658 0.0 118.003 High  
cufflinks 1.29605 0.0 4.50295   Low
cufflinks 95.7185 0.0 257.58 High  
cufflinks 7.72868 0.0 22.1635    
cufflinks 4.06757 0.0 12.3998    
cufflinks 3.44265 0.0 10.6922    
cufflinks 19.3552 0.0 50.8884    
cufflinks 0.593045 0.0 2.21177   Low
cufflinks 135.403 0.0 376.627 High High
cufflinks 41.0489 0.0 106.116 High  

0 Strain