Gene : Phvul.011G079400 P. vulgaris v2.1
Defline:  (1 of 6) K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) Genomic Order:  798
Name:  ? Phvul.011G079400 Secondary Identifier:  ? PAC:37155948
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G079400 0.5kb upstream 0.5kb upstream 1397 true Chr11: 7273613-7275009 Phaseolus vulgaris
Phvul.011G079400 0.5kb upstream 0.5kb upstream 500 false Chr11: 7274510-7275009 Phaseolus vulgaris
Phvul.011G079400 0.5kb downstream 0.5kb downstream 1397 true Chr11: 7273113-7274509 Phaseolus vulgaris
Phvul.011G079400 0.5kb downstream 0.5kb downstream 500 false Chr11: 7273113-7273612 Phaseolus vulgaris
Phvul.011G079400 1.0kb upstream 1.0kb upstream 1897 true Chr11: 7273613-7275509 Phaseolus vulgaris
Phvul.011G079400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 7274510-7275509 Phaseolus vulgaris
Phvul.011G079400 1.0kb downstream 1.0kb downstream 1897 true Chr11: 7272613-7274509 Phaseolus vulgaris
Phvul.011G079400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 7272613-7273612 Phaseolus vulgaris
Phvul.011G079400 2.0kb upstream 2.0kb upstream 2897 true Chr11: 7273613-7276509 Phaseolus vulgaris
Phvul.011G079400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 7274510-7276509 Phaseolus vulgaris
Phvul.011G079400 2.0kb downstream 2.0kb downstream 2897 true Chr11: 7271613-7274509 Phaseolus vulgaris
Phvul.011G079400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 7271613-7273612 Phaseolus vulgaris
Phvul.011G079400 5.0kb upstream 5.0kb upstream 5897 true Chr11: 7273613-7279509 Phaseolus vulgaris
Phvul.011G079400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 7274510-7279509 Phaseolus vulgaris
Phvul.011G079400 5.0kb downstream 5.0kb downstream 5897 true Chr11: 7268613-7274509 Phaseolus vulgaris
Phvul.011G079400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 7268613-7273612 Phaseolus vulgaris
Phvul.011G079400 10.0kb upstream 10.0kb upstream 10897 true Chr11: 7273613-7284509 Phaseolus vulgaris
Phvul.011G079400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 7274510-7284509 Phaseolus vulgaris
Phvul.011G079400 10.0kb downstream 10.0kb downstream 10897 true Chr11: 7263613-7274509 Phaseolus vulgaris
Phvul.011G079400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 7263613-7273612 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299563 5265 Fabidae View MSA
124068553 5270 Rosid View MSA
123746729 5271 Pentapetalae View MSA
122788263 5272 Eudicot View MSA
122050201 5273 Angiosperm View MSA
121345263 5274 Embryophyte View MSA
123424135 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 272.393 0.0 792.662 High  
cufflinks 444.485 0.0 1387.54 High High
cufflinks 229.973 0.0 650.134 High  
cufflinks 429.361 0.0 1345.78 High High
cufflinks 354.722 0.0 1072.56 High  
cufflinks 193.439 0.0 538.043 High Low
cufflinks 196.52 0.0 552.305 High Low
cufflinks 248.142 0.0 711.234 High  
cufflinks 331.222 0.0 994.19 High  
cufflinks 165.021 0.0 452.876 High Low
cufflinks 359.231 0.0 1091.94 High  

0 Strain