Gene : Phvul.011G080500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR33604:SF2 - GLYCOSYLTRANSFERASE FAMILY PROTEIN 2 Genomic Order:  809
Name:  ? Phvul.011G080500 Secondary Identifier:  ? PAC:37156377
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G080500 0.5kb upstream 0.5kb upstream 4634 true Chr11: 7445062-7449695 Phaseolus vulgaris
Phvul.011G080500 0.5kb upstream 0.5kb upstream 500 false Chr11: 7449196-7449695 Phaseolus vulgaris
Phvul.011G080500 0.5kb downstream 0.5kb downstream 4634 true Chr11: 7444562-7449195 Phaseolus vulgaris
Phvul.011G080500 0.5kb downstream 0.5kb downstream 500 false Chr11: 7444562-7445061 Phaseolus vulgaris
Phvul.011G080500 1.0kb upstream 1.0kb upstream 5134 true Chr11: 7445062-7450195 Phaseolus vulgaris
Phvul.011G080500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 7449196-7450195 Phaseolus vulgaris
Phvul.011G080500 1.0kb downstream 1.0kb downstream 5134 true Chr11: 7444062-7449195 Phaseolus vulgaris
Phvul.011G080500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 7444062-7445061 Phaseolus vulgaris
Phvul.011G080500 2.0kb upstream 2.0kb upstream 6134 true Chr11: 7445062-7451195 Phaseolus vulgaris
Phvul.011G080500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 7449196-7451195 Phaseolus vulgaris
Phvul.011G080500 2.0kb downstream 2.0kb downstream 6134 true Chr11: 7443062-7449195 Phaseolus vulgaris
Phvul.011G080500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 7443062-7445061 Phaseolus vulgaris
Phvul.011G080500 5.0kb upstream 5.0kb upstream 9134 true Chr11: 7445062-7454195 Phaseolus vulgaris
Phvul.011G080500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 7449196-7454195 Phaseolus vulgaris
Phvul.011G080500 5.0kb downstream 5.0kb downstream 9134 true Chr11: 7440062-7449195 Phaseolus vulgaris
Phvul.011G080500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 7440062-7445061 Phaseolus vulgaris
Phvul.011G080500 10.0kb upstream 10.0kb upstream 14134 true Chr11: 7445062-7459195 Phaseolus vulgaris
Phvul.011G080500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 7449196-7459195 Phaseolus vulgaris
Phvul.011G080500 10.0kb downstream 10.0kb downstream 14134 true Chr11: 7435062-7449195 Phaseolus vulgaris
Phvul.011G080500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 7435062-7445061 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305292 5265 Fabidae View MSA
124061550 5270 Rosid View MSA
123753195 5271 Pentapetalae View MSA
122791736 5272 Eudicot View MSA
122041734 5273 Angiosperm View MSA
121351549 5274 Embryophyte View MSA
123382221 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0661653 0.0 0.274461 Low  
cufflinks 0.030578 0.0 0.136088 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.104855 0.0 0.420385 Low  
cufflinks 0.0386598 0.0 0.169325 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.753824 0.0 2.5181    
cufflinks 0.12262 0.0 0.48268 Low  
cufflinks 4.39018 0.0 12.1205   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0229554 0.0 0.10576 Low  

0 Strain