Gene : Phvul.L004143 P. vulgaris v2.1
Defline:  (1 of 1) PTHR30509//PTHR30509:SF7 - P-HYDROXYBENZOIC ACID EFFLUX PUMP SUBUNIT-RELATED // SUBFAMILY NOT NAMED Genomic Order:  26
Name:  ? Phvul.L004143 Secondary Identifier:  ? PAC:37179007
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L004143 0.5kb upstream 0.5kb upstream 4182 true scaffold_15: 206563-210744 Phaseolus vulgaris
Phvul.L004143 0.5kb upstream 0.5kb upstream 500 false scaffold_15: 210245-210744 Phaseolus vulgaris
Phvul.L004143 0.5kb downstream 0.5kb downstream 4182 true scaffold_15: 206063-210244 Phaseolus vulgaris
Phvul.L004143 0.5kb downstream 0.5kb downstream 500 false scaffold_15: 206063-206562 Phaseolus vulgaris
Phvul.L004143 1.0kb upstream 1.0kb upstream 4682 true scaffold_15: 206563-211244 Phaseolus vulgaris
Phvul.L004143 1.0kb upstream 1.0kb upstream 1000 false scaffold_15: 210245-211244 Phaseolus vulgaris
Phvul.L004143 1.0kb downstream 1.0kb downstream 4682 true scaffold_15: 205563-210244 Phaseolus vulgaris
Phvul.L004143 1.0kb downstream 1.0kb downstream 1000 false scaffold_15: 205563-206562 Phaseolus vulgaris
Phvul.L004143 2.0kb upstream 2.0kb upstream 5682 true scaffold_15: 206563-212244 Phaseolus vulgaris
Phvul.L004143 2.0kb upstream 2.0kb upstream 2000 false scaffold_15: 210245-212244 Phaseolus vulgaris
Phvul.L004143 2.0kb downstream 2.0kb downstream 5682 true scaffold_15: 204563-210244 Phaseolus vulgaris
Phvul.L004143 2.0kb downstream 2.0kb downstream 2000 false scaffold_15: 204563-206562 Phaseolus vulgaris
Phvul.L004143 5.0kb upstream 5.0kb upstream 8682 true scaffold_15: 206563-215244 Phaseolus vulgaris
Phvul.L004143 5.0kb upstream 5.0kb upstream 5000 false scaffold_15: 210245-215244 Phaseolus vulgaris
Phvul.L004143 5.0kb downstream 5.0kb downstream 8682 true scaffold_15: 201563-210244 Phaseolus vulgaris
Phvul.L004143 5.0kb downstream 5.0kb downstream 5000 false scaffold_15: 201563-206562 Phaseolus vulgaris
Phvul.L004143 10.0kb upstream 10.0kb upstream 13682 true scaffold_15: 206563-220244 Phaseolus vulgaris
Phvul.L004143 10.0kb upstream 10.0kb upstream 10000 false scaffold_15: 210245-220244 Phaseolus vulgaris
Phvul.L004143 10.0kb downstream 10.0kb downstream 13682 true scaffold_15: 196563-210244 Phaseolus vulgaris
Phvul.L004143 10.0kb downstream 10.0kb downstream 10000 false scaffold_15: 196563-206562 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303761 5265 Fabidae View MSA
124066228 5270 Rosid View MSA
123740687 5271 Pentapetalae View MSA
122792207 5272 Eudicot View MSA
122049763 5273 Angiosperm View MSA
121311579 5274 Embryophyte View MSA
123426267 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.145895 0.0 0.580869 Low  
cufflinks 0.879234 0.0 2.98596   High
cufflinks 0.0258579 0.0 0.120775 Low Low
cufflinks 0.0548801 0.0 0.237985 Low  
cufflinks 0.373969 0.0 1.38523 Low  
cufflinks 0.0570353 0.0 0.246103 Low  
cufflinks 0.176886 0.0 0.693261 Low  
cufflinks 0.0593702 0.0 0.2545 Low  
cufflinks 0.461543 0.0 1.67505 Low  
cufflinks 0.0913046 0.0 0.377591 Low  
cufflinks 0.640926 0.0 2.25248   High

0 Strain